Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC020893.1-201ENST00000502452 580 ntBASIC6□□□□□ -1.45
ERCC3P19447 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6□□□□□ -1.45
ERCC3P19447 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6□□□□□ -1.45
ERCC3P19447 AC091912.1-201ENST00000511351 248 ntBASIC6□□□□□ -1.45
ERCC3P19447 AC017037.2-201ENST00000513850 890 ntBASIC6□□□□□ -1.45
ERCC3P19447 AC114797.1-201ENST00000514003 728 ntBASIC6□□□□□ -1.45
ERCC3P19447 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC6□□□□□ -1.45
ERCC3P19447 AL133271.1-201ENST00000538229 291 ntBASIC6□□□□□ -1.45
ERCC3P19447 AC008033.2-201ENST00000542626 177 ntBASIC6□□□□□ -1.45
ERCC3P19447 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC6□□□□□ -1.45
ERCC3P19447 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6□□□□□ -1.45
ERCC3P19447 AC025678.1-201ENST00000567861 338 ntBASIC6□□□□□ -1.45
ERCC3P19447 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC6□□□□□ -1.45
ERCC3P19447 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
ERCC3P19447 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6□□□□□ -1.45
ERCC3P19447 AC008277.2-201ENST00000605196 797 ntBASIC6□□□□□ -1.45
ERCC3P19447 AC244107.2-201ENST00000611773 76 ntBASIC6□□□□□ -1.45
ERCC3P19447 AL627230.1-201ENST00000613077 211 ntBASIC6□□□□□ -1.45
ERCC3P19447 AL591926.8-201ENST00000616876 211 ntBASIC6□□□□□ -1.45
ERCC3P19447 AC002550.2-201ENST00000621246 394 ntBASIC6□□□□□ -1.45
ERCC3P19447 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC6□□□□□ -1.45
ERCC3P19447 AC019226.1-201ENST00000625666 515 ntBASIC6□□□□□ -1.45
ERCC3P19447 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6□□□□□ -1.45
ERCC3P19447 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6□□□□□ -1.45
ERCC3P19447 AC135068.12-201ENST00000637370 931 ntBASIC6□□□□□ -1.45
ERCC3P19447 STK31-205ENST00000433467 3085 ntTSL 2 BASIC6□□□□□ -1.45
ERCC3P19447 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6□□□□□ -1.45
ERCC3P19447 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6□□□□□ -1.45
ERCC3P19447 AC027287.1-201ENST00000553115 1453 ntBASIC6□□□□□ -1.45
ERCC3P19447 AC012618.3-205ENST00000637896 1496 ntBASIC6□□□□□ -1.45
ERCC3P19447 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
ERCC3P19447 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
ERCC3P19447 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ERCC3P19447 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ERCC3P19447 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
ERCC3P19447 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ERCC3P19447 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
ERCC3P19447 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.99□□□□□ -1.45
ERCC3P19447 LINC00622-201ENST00000562811 1570 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 Y_RNA.295-201ENST00000364918 102 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 RNU5E-4P-201ENST00000364931 120 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
ERCC3P19447 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.99□□□□□ -1.45
ERCC3P19447 COX6B1P1-201ENST00000415962 213 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 OR2AM1P-201ENST00000422137 422 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 DDX39BP1-205ENST00000422507 192 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 AC009480.2-201ENST00000422916 432 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ERCC3P19447 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.99□□□□□ -1.45
ERCC3P19447 MTCO2P19-201ENST00000427513 598 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.99□□□□□ -1.45
ERCC3P19447 ELOCP18-201ENST00000434209 337 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 BNIP3P2-201ENST00000441221 577 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.99□□□□□ -1.45
ERCC3P19447 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.99□□□□□ -1.45
ERCC3P19447 TPT1P14-201ENST00000448018 505 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 RPL29P29-201ENST00000448725 423 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 AC079168.1-201ENST00000458741 345 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 SNORD121B-201ENST00000458838 81 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 AC023598.1-201ENST00000472521 361 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 AK3P4-201ENST00000504283 583 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.99□□□□□ -1.45
ERCC3P19447 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.99□□□□□ -1.45
ERCC3P19447 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC5.99□□□□□ -1.45
ERCC3P19447 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.99□□□□□ -1.45
ERCC3P19447 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC5.99□□□□□ -1.45
ERCC3P19447 RNU6-1220P-201ENST00000517126 108 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 AC022616.3-201ENST00000523940 148 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 AC109635.3-201ENST00000529536 185 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 CR383656.7-201ENST00000548164 174 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 AC093591.2-201ENST00000565254 3843 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ERCC3P19447 AC009962.1-201ENST00000567327 3813 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 MIR4330-201ENST00000579077 105 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 AC233702.9-201ENST00000581528 203 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 LLPHP1-201ENST00000603571 367 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 AC087283.1-201ENST00000604029 1074 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 AC008536.2-201ENST00000607284 349 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 AC105429.2-201ENST00000610567 517 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 uc_338.18-201ENST00000615451 175 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ERCC3P19447 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.99□□□□□ -1.45
ERCC3P19447 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.99□□□□□ -1.45
ERCC3P19447 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.99□□□□□ -1.45
ERCC3P19447 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ERCC3P19447 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.99□□□□□ -1.45
ERCC3P19447 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
ERCC3P19447 EIF2AP4-201ENST00000424793 1781 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 CR848007.1-201ENST00000442354 1699 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
ERCC3P19447 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ERCC3P19447 RN7SKP95-201ENST00000362860 303 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 RNA5SP90-201ENST00000364801 99 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 Y_RNA.381-201ENST00000365666 102 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ERCC3P19447 RNU6-483P-201ENST00000384088 108 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 RNU6-356P-201ENST00000384140 107 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 PPIAP9-201ENST00000403866 498 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 RN7SKP285-201ENST00000410137 318 ntBASIC5.98□□□□□ -1.45
ERCC3P19447 RNA5SP56-201ENST00000410277 118 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms