Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AC008033.1-201ENST00000216407 1162 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 RNA5SP502-201ENST00000362694 119 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 RNU6-1249P-201ENST00000363237 111 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 RNA5SP455-201ENST00000365190 119 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 SNORA75-201ENST00000384158 137 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 SNORD115.1-201ENST00000391109 76 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AL049693.1-201ENST00000402760 611 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AL359704.1-201ENST00000411586 781 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 HMGN1P14-201ENST00000412459 517 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AC007899.1-201ENST00000412776 775 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AC092447.6-201ENST00000414578 210 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AC079355.1-201ENST00000421770 223 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 UBE2V1P13-201ENST00000436983 439 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 RPL22P17-201ENST00000438729 315 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AC112653.1-201ENST00000443851 386 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AL121877.1-201ENST00000453704 622 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 RN7SL97P-201ENST00000486780 299 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AC011005.3-201ENST00000491624 395 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 RN7SL244P-201ENST00000493405 297 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AC025445.1-201ENST00000502728 300 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AC090281.1-201ENST00000523019 276 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AP002453.2-201ENST00000533503 320 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AC090616.5-202ENST00000582111 297 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 SUMO2P15-201ENST00000604285 278 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AC112191.3-201ENST00000604371 277 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AC104073.3-201ENST00000610942 955 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AC138749.5-201ENST00000611461 208 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 EIF3FP1-201ENST00000613970 806 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AC116165.2-201ENST00000616705 206 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AL353662.3-201ENST00000625131 237 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AC244517.1-201ENST00000606030 2086 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
RNF220Q5VTB9 AC092125.1-201ENST00000562568 1995 ntBASIC4.53□□□□□ -1.68
RNF220Q5VTB9 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
RNF220Q5VTB9 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 FRG1BP-201ENST00000278882 761 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 SNORA40.3-201ENST00000390964 122 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 DEFB108C-201ENST00000400154 252 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 Y_RNA.608-201ENST00000410647 95 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 CHIAP3-201ENST00000423668 1133 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 RWDD4P2-201ENST00000426392 563 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 MTND4LP10-201ENST00000435146 291 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 AC000111.2-201ENST00000448200 210 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 AL162388.1-201ENST00000450912 352 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 MTND1P27-201ENST00000451117 902 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 AC098824.1-201ENST00000453565 980 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 AL033528.1-201ENST00000453780 140 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 AC133473.1-201ENST00000455173 299 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 SNORD121B-201ENST00000458838 81 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 SNORD42A-201ENST00000459584 64 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 RPL23AP2-201ENST00000471227 466 ntBASIC4.52□□□□□ -1.69
RNF220Q5VTB9 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.52□□□□□ -1.69
RNF220Q5VTB9 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms