Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 TOMM22P1-201ENST00000418578 312 ntBASIC2.69□□□□□ -1.98
CCDC58Q4VC31 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 AC233728.2-201ENST00000425348 757 ntBASIC2.69□□□□□ -1.98
CCDC58Q4VC31 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 AC027673.1-201ENST00000456245 405 ntBASIC2.69□□□□□ -1.98
CCDC58Q4VC31 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 OR5G4P-201ENST00000525251 760 ntBASIC2.69□□□□□ -1.98
CCDC58Q4VC31 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 RN7SL339P-201ENST00000580597 296 ntBASIC2.69□□□□□ -1.98
CCDC58Q4VC31 MIR3670-2-201ENST00000582974 65 ntBASIC2.69□□□□□ -1.98
CCDC58Q4VC31 MIR3670-1-201ENST00000584160 65 ntBASIC2.69□□□□□ -1.98
CCDC58Q4VC31 MIR3670-3-201ENST00000584855 65 ntBASIC2.69□□□□□ -1.98
CCDC58Q4VC31 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 CKS1BP3-201ENST00000600888 237 ntBASIC2.69□□□□□ -1.98
CCDC58Q4VC31 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 RPL12P50-201ENST00000603116 116 ntBASIC2.69□□□□□ -1.98
CCDC58Q4VC31 AC019159.1-201ENST00000605094 187 ntBASIC2.69□□□□□ -1.98
CCDC58Q4VC31 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 MIR3670-4-201ENST00000612260 65 ntBASIC2.69□□□□□ -1.98
CCDC58Q4VC31 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CCDC58Q4VC31 AP003122.5-201ENST00000527668 3766 ntBASIC2.69□□□□□ -1.98
CCDC58Q4VC31 Z82195.2-201ENST00000612348 18351 ntBASIC2.68□□□□□ -1.98
CCDC58Q4VC31 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.68□□□□□ -1.98
CCDC58Q4VC31 RNA5SP50-201ENST00000363731 107 ntBASIC2.68□□□□□ -1.98
CCDC58Q4VC31 SNORA25.6-201ENST00000364121 118 ntBASIC2.68□□□□□ -1.98
CCDC58Q4VC31 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
CCDC58Q4VC31 SNORA7.4-201ENST00000384249 137 ntBASIC2.68□□□□□ -1.98
CCDC58Q4VC31 CYCSP19-201ENST00000411715 316 ntBASIC2.68□□□□□ -1.98
CCDC58Q4VC31 BX323014.1-201ENST00000412876 237 ntBASIC2.68□□□□□ -1.98
CCDC58Q4VC31 AC097713.2-201ENST00000430199 356 ntBASIC2.68□□□□□ -1.98
CCDC58Q4VC31 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC58Q4VC31 CYCSP35-201ENST00000451978 304 ntBASIC2.68□□□□□ -1.98
CCDC58Q4VC31 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC58Q4VC31 RN7SL601P-201ENST00000471221 293 ntBASIC2.68□□□□□ -1.98
CCDC58Q4VC31 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC58Q4VC31 AC026403.1-201ENST00000518938 295 ntBASIC2.68□□□□□ -1.98
CCDC58Q4VC31 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC58Q4VC31 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC58Q4VC31 AC034105.3-201ENST00000565294 442 ntBASIC2.68□□□□□ -1.98
CCDC58Q4VC31 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC58Q4VC31 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.68□□□□□ -1.98
CCDC58Q4VC31 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC58Q4VC31 AC006504.3-201ENST00000586818 523 ntBASIC2.68□□□□□ -1.98
CCDC58Q4VC31 AC024941.1-201ENST00000612250 334 ntBASIC2.68□□□□□ -1.98
CCDC58Q4VC31 AL161637.1-201ENST00000622380 412 ntBASIC2.68□□□□□ -1.98
CCDC58Q4VC31 AC068724.3-201ENST00000625906 87 ntBASIC2.68□□□□□ -1.98
CCDC58Q4VC31 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC2.68□□□□□ -1.98
CCDC58Q4VC31 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.68□□□□□ -1.98
CCDC58Q4VC31 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC58Q4VC31 AL672167.1-206ENST00000356293 943 ntBASIC2.67□□□□□ -1.98
CCDC58Q4VC31 RNA5SP124-201ENST00000362739 110 ntBASIC2.67□□□□□ -1.98
CCDC58Q4VC31 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CCDC58Q4VC31 TAF9BP1-201ENST00000396646 746 ntBASIC2.67□□□□□ -1.98
CCDC58Q4VC31 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC58Q4VC31 DNAJC19P6-201ENST00000401853 280 ntBASIC2.67□□□□□ -1.98
CCDC58Q4VC31 METTL5-204ENST00000409340 472 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC58Q4VC31 RPS29P4-201ENST00000414733 161 ntBASIC2.67□□□□□ -1.98
CCDC58Q4VC31 AL451074.5-201ENST00000415894 435 ntBASIC2.67□□□□□ -1.98
CCDC58Q4VC31 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.67□□□□□ -1.98
CCDC58Q4VC31 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.67□□□□□ -1.98
CCDC58Q4VC31 MTATP6P4-201ENST00000427725 675 ntBASIC2.67□□□□□ -1.98
CCDC58Q4VC31 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC58Q4VC31 RPL21P41-201ENST00000459863 264 ntBASIC2.67□□□□□ -1.98
CCDC58Q4VC31 AC022336.1-201ENST00000475510 337 ntBASIC2.67□□□□□ -1.98
CCDC58Q4VC31 AC103975.1-201ENST00000482506 483 ntBASIC2.67□□□□□ -1.98
CCDC58Q4VC31 AC073522.1-201ENST00000483312 377 ntBASIC2.67□□□□□ -1.98
CCDC58Q4VC31 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.67□□□□□ -1.98
CCDC58Q4VC31 DSTNP2-201ENST00000504533 515 ntBASIC2.67□□□□□ -1.98
CCDC58Q4VC31 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC58Q4VC31 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC58Q4VC31 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.67□□□□□ -1.98
CCDC58Q4VC31 MTND4LP31-201ENST00000514859 294 ntBASIC2.67□□□□□ -1.98
CCDC58Q4VC31 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.67□□□□□ -1.98
CCDC58Q4VC31 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.67□□□□□ -1.98
CCDC58Q4VC31 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC58Q4VC31 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.67□□□□□ -1.98
CCDC58Q4VC31 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CCDC58Q4VC31 ZNF415P1-201ENST00000582279 1166 ntBASIC2.67□□□□□ -1.98
CCDC58Q4VC31 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.67□□□□□ -1.98
CCDC58Q4VC31 AL162274.2-201ENST00000614406 332 ntBASIC2.67□□□□□ -1.98
CCDC58Q4VC31 AC245389.2-201ENST00000616023 576 ntBASIC2.67□□□□□ -1.98
CCDC58Q4VC31 AC243756.2-201ENST00000618406 463 ntBASIC2.67□□□□□ -1.98
CCDC58Q4VC31 AC242843.1-201ENST00000618702 573 ntBASIC2.67□□□□□ -1.98
CCDC58Q4VC31 AC010338.1-201ENST00000621823 717 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms