Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 HPRT1P1-201ENST00000509498 657 ntBASIC2.28□□□□□ -2.04
CKS1BP61024 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.28□□□□□ -2.04
CKS1BP61024 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.28□□□□□ -2.04
CKS1BP61024 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.28□□□□□ -2.04
CKS1BP61024 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC2.28□□□□□ -2.04
CKS1BP61024 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.28□□□□□ -2.04
CKS1BP61024 AC016065.2-201ENST00000514530 444 ntBASIC2.28□□□□□ -2.04
CKS1BP61024 AP002404.1-201ENST00000532005 451 ntBASIC2.28□□□□□ -2.04
CKS1BP61024 AP002812.4-201ENST00000532139 286 ntBASIC2.28□□□□□ -2.04
CKS1BP61024 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC2.28□□□□□ -2.04
CKS1BP61024 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CKS1BP61024 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.28□□□□□ -2.04
CKS1BP61024 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.28□□□□□ -2.04
CKS1BP61024 AL137843.1-201ENST00000605078 385 ntBASIC2.28□□□□□ -2.04
CKS1BP61024 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.28□□□□□ -2.04
CKS1BP61024 AC005021.1-201ENST00000608730 355 ntBASIC2.28□□□□□ -2.04
CKS1BP61024 AC084036.1-201ENST00000609190 508 ntBASIC2.28□□□□□ -2.04
CKS1BP61024 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC2.28□□□□□ -2.04
CKS1BP61024 MIR6076-201ENST00000617521 113 ntBASIC2.28□□□□□ -2.04
CKS1BP61024 AL357559.1-201ENST00000622228 274 ntBASIC2.28□□□□□ -2.04
CKS1BP61024 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.28□□□□□ -2.04
CKS1BP61024 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CKS1BP61024 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CKS1BP61024 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CKS1BP61024 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.28□□□□□ -2.05
CKS1BP61024 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.28□□□□□ -2.05
CKS1BP61024 ZNF734P-201ENST00000419494 1534 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.27□□□□□ -2.05
CKS1BP61024 AC135776.4-201ENST00000624300 1904 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CKS1BP61024 RPL32P3-201ENST00000359025 275 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CKS1BP61024 SNORA46-201ENST00000384762 135 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CKS1BP61024 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CKS1BP61024 AC245054.2-201ENST00000415639 319 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 AC012065.2-201ENST00000421295 375 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.27□□□□□ -2.05
CKS1BP61024 AC016712.1-201ENST00000431088 378 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 NDUFA5P10-201ENST00000432147 357 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC2.27□□□□□ -2.05
CKS1BP61024 CST9LP2-201ENST00000437612 320 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 HMGB3P11-201ENST00000440127 604 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC2.27□□□□□ -2.05
CKS1BP61024 RPL34P26-201ENST00000445636 354 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 Z99127.3-201ENST00000448158 395 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC2.27□□□□□ -2.05
CKS1BP61024 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.27□□□□□ -2.05
CKS1BP61024 AP000705.1-201ENST00000454567 350 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 AC026979.1-201ENST00000492525 396 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 CDC42P4-201ENST00000510507 563 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 AC008716.1-201ENST00000511084 513 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 AC026402.1-201ENST00000513642 170 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 RN7SKP18-201ENST00000516005 275 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 RNA5SP367-201ENST00000516557 118 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.27□□□□□ -2.05
CKS1BP61024 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.27□□□□□ -2.05
CKS1BP61024 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.27□□□□□ -2.05
CKS1BP61024 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.27□□□□□ -2.05
CKS1BP61024 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC2.27□□□□□ -2.05
CKS1BP61024 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC2.27□□□□□ -2.05
CKS1BP61024 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.27□□□□□ -2.05
CKS1BP61024 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.27□□□□□ -2.05
CKS1BP61024 AC107954.1-201ENST00000565906 727 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 MIR3670-2-201ENST00000582974 65 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 MIR3670-1-201ENST00000584160 65 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 MIR3670-3-201ENST00000584855 65 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 AC103881.1-201ENST00000603476 538 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 AL451086.1-201ENST00000605596 223 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 RNU1-30P-201ENST00000606575 163 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 AL591516.1-201ENST00000611326 274 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 MIR3670-4-201ENST00000612260 65 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CKS1BP61024 AC073476.4-201ENST00000628409 72 ntBASIC2.27□□□□□ -2.05
CKS1BP61024 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.27□□□□□ -2.05
CKS1BP61024 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CKS1BP61024 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CKS1BP61024 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
CKS1BP61024 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CKS1BP61024 SNORD9-201ENST00000362566 104 ntBASIC2.26□□□□□ -2.05
CKS1BP61024 MIR627-201ENST00000384979 97 ntBASIC2.26□□□□□ -2.05
CKS1BP61024 AC096533.1-201ENST00000411645 353 ntBASIC2.26□□□□□ -2.05
CKS1BP61024 AC105402.1-201ENST00000413336 545 ntBASIC2.26□□□□□ -2.05
CKS1BP61024 TCEA1P4-201ENST00000415066 844 ntBASIC2.26□□□□□ -2.05
CKS1BP61024 AL137014.1-201ENST00000420490 1226 ntBASIC2.26□□□□□ -2.05
CKS1BP61024 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.26□□□□□ -2.05
CKS1BP61024 RPL36AP6-201ENST00000435770 321 ntBASIC2.26□□□□□ -2.05
CKS1BP61024 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.26□□□□□ -2.05
CKS1BP61024 RRM2P4-201ENST00000441721 562 ntBASIC2.26□□□□□ -2.05
CKS1BP61024 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.26□□□□□ -2.05
CKS1BP61024 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.26□□□□□ -2.05
CKS1BP61024 AL031183.1-201ENST00000457667 207 ntBASIC2.26□□□□□ -2.05
CKS1BP61024 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC2.26□□□□□ -2.05
CKS1BP61024 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.26□□□□□ -2.05
CKS1BP61024 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.26□□□□□ -2.05
CKS1BP61024 AC112198.1-201ENST00000505369 1220 ntBASIC2.26□□□□□ -2.05
CKS1BP61024 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CKS1BP61024 AC021146.7-201ENST00000509604 775 ntBASIC2.26□□□□□ -2.05
CKS1BP61024 FCF1P8-201ENST00000510322 597 ntBASIC2.26□□□□□ -2.05
CKS1BP61024 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms