Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX4O60224 AC145350.1-201ENST00000567426 208 ntBASIC3.82□□□□□ -1.8
SSX4O60224 MAGOH2P-202ENST00000584384 429 ntBASIC3.82□□□□□ -1.8
SSX4O60224 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX4O60224 VN1R79P-201ENST00000593540 513 ntBASIC3.82□□□□□ -1.8
SSX4O60224 AC083899.3-201ENST00000603413 594 ntBASIC3.82□□□□□ -1.8
SSX4O60224 AC067959.1-201ENST00000604334 379 ntBASIC3.82□□□□□ -1.8
SSX4O60224 AC112220.3-201ENST00000605502 502 ntBASIC3.82□□□□□ -1.8
SSX4O60224 ZYXP1-201ENST00000617638 118 ntBASIC3.82□□□□□ -1.8
SSX4O60224 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.82□□□□□ -1.8
SSX4O60224 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SSX4O60224 AC103858.2-201ENST00000621471 543 ntBASIC3.82□□□□□ -1.8
SSX4O60224 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SSX4O60224 AC231657.1-201ENST00000624313 397 ntBASIC3.82□□□□□ -1.8
SSX4O60224 AC079416.3-201ENST00000624479 549 ntBASIC3.82□□□□□ -1.8
SSX4O60224 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.82□□□□□ -1.8
SSX4O60224 AC019226.2-201ENST00000625973 424 ntBASIC3.82□□□□□ -1.8
SSX4O60224 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.82□□□□□ -1.8
SSX4O60224 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.82□□□□□ -1.8
SSX4O60224 CYP3A51P-201ENST00000633513 256 ntBASIC3.82□□□□□ -1.8
SSX4O60224 AC097655.1-201ENST00000635075 318 ntBASIC3.82□□□□□ -1.8
SSX4O60224 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSX4O60224 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSX4O60224 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
SSX4O60224 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.82□□□□□ -1.8
SSX4O60224 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SSX4O60224 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSX4O60224 SGO1P2-201ENST00000429458 1589 ntBASIC3.81□□□□□ -1.8
SSX4O60224 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSX4O60224 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.81□□□□□ -1.8
SSX4O60224 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSX4O60224 AP002907.1-201ENST00000606361 1430 ntBASIC3.81□□□□□ -1.8
SSX4O60224 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSX4O60224 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SSX4O60224 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SSX4O60224 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSX4O60224 RNU6-931P-201ENST00000363850 107 ntBASIC3.81□□□□□ -1.8
SSX4O60224 RNA5SP515-201ENST00000364570 118 ntBASIC3.81□□□□□ -1.8
SSX4O60224 ATP5F1P3-201ENST00000397213 657 ntBASIC3.81□□□□□ -1.8
SSX4O60224 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.81□□□□□ -1.8
SSX4O60224 MTND4LP20-201ENST00000402379 270 ntBASIC3.81□□□□□ -1.8
SSX4O60224 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.81□□□□□ -1.8
SSX4O60224 USP9YP33-201ENST00000412220 421 ntBASIC3.81□□□□□ -1.8
SSX4O60224 CYP4F29P-201ENST00000420685 446 ntBASIC3.81□□□□□ -1.8
SSX4O60224 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.81□□□□□ -1.8
SSX4O60224 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.81□□□□□ -1.8
SSX4O60224 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SSX4O60224 USP9YP35-201ENST00000435696 412 ntBASIC3.81□□□□□ -1.8
SSX4O60224 YWHAZP7-201ENST00000436906 631 ntBASIC3.81□□□□□ -1.8
SSX4O60224 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC3.81□□□□□ -1.8
SSX4O60224 AL354941.1-201ENST00000438600 464 ntBASIC3.81□□□□□ -1.8
SSX4O60224 MTCYBP34-201ENST00000439552 670 ntBASIC3.81□□□□□ -1.8
SSX4O60224 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.81□□□□□ -1.8
SSX4O60224 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.81□□□□□ -1.8
SSX4O60224 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.81□□□□□ -1.8
SSX4O60224 AC114755.5-201ENST00000447760 831 ntBASIC3.81□□□□□ -1.8
SSX4O60224 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.81□□□□□ -1.8
SSX4O60224 SNORD108-201ENST00000459332 71 ntBASIC3.81□□□□□ -1.8
SSX4O60224 AC026410.2-201ENST00000460281 156 ntBASIC3.81□□□□□ -1.8
SSX4O60224 RN7SL98P-201ENST00000462271 300 ntBASIC3.81□□□□□ -1.8
SSX4O60224 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.81□□□□□ -1.8
SSX4O60224 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.81□□□□□ -1.8
SSX4O60224 TMEM251P1-201ENST00000503717 318 ntBASIC3.81□□□□□ -1.8
SSX4O60224 AC108145.1-201ENST00000503770 153 ntBASIC3.81□□□□□ -1.8
SSX4O60224 AC147055.4-201ENST00000504399 745 ntBASIC3.81□□□□□ -1.8
SSX4O60224 AC020593.1-201ENST00000507399 299 ntBASIC3.81□□□□□ -1.8
SSX4O60224 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.81□□□□□ -1.8
SSX4O60224 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
SSX4O60224 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.81□□□□□ -1.8
SSX4O60224 DEFB131D-201ENST00000526803 184 ntBASIC3.81□□□□□ -1.8
SSX4O60224 AP000926.4-201ENST00000527351 454 ntBASIC3.81□□□□□ -1.8
SSX4O60224 AP000827.1-201ENST00000527814 258 ntBASIC3.81□□□□□ -1.8
SSX4O60224 CYCSP29-201ENST00000533731 318 ntBASIC3.81□□□□□ -1.8
SSX4O60224 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSX4O60224 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.81□□□□□ -1.8
SSX4O60224 AC008751.2-201ENST00000597885 980 ntBASIC3.81□□□□□ -1.8
SSX4O60224 VN1R85P-201ENST00000601587 426 ntBASIC3.81□□□□□ -1.8
SSX4O60224 AC006539.2-201ENST00000601729 572 ntBASIC3.81□□□□□ -1.8
SSX4O60224 CLIC4P2-201ENST00000601934 717 ntBASIC3.81□□□□□ -1.8
SSX4O60224 AC021171.1-201ENST00000603137 706 ntBASIC3.81□□□□□ -1.8
SSX4O60224 BNIP3P11-201ENST00000603878 563 ntBASIC3.81□□□□□ -1.8
SSX4O60224 AC064801.1-201ENST00000612025 407 ntBASIC3.81□□□□□ -1.8
SSX4O60224 AC024941.1-201ENST00000612250 334 ntBASIC3.81□□□□□ -1.8
SSX4O60224 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.81□□□□□ -1.8
SSX4O60224 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.81□□□□□ -1.8
SSX4O60224 AC073968.1-201ENST00000618594 637 ntBASIC3.81□□□□□ -1.8
SSX4O60224 AC131159.1-201ENST00000621854 213 ntBASIC3.81□□□□□ -1.8
SSX4O60224 AP003485.2-201ENST00000623636 610 ntBASIC3.81□□□□□ -1.8
SSX4O60224 AC006065.6-201ENST00000625201 545 ntBASIC3.81□□□□□ -1.8
SSX4O60224 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.81□□□□□ -1.8
SSX4O60224 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.81□□□□□ -1.8
SSX4O60224 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.81□□□□□ -1.8
SSX4O60224 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
SSX4O60224 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.81□□□□□ -1.8
SSX4O60224 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.81□□□□□ -1.8
SSX4O60224 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
SSX4O60224 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SSX4O60224 AL079343.1-201ENST00000572358 1771 ntBASIC3.81□□□□□ -1.8
SSX4O60224 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
SSX4O60224 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms