Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 Y_RNA.314-201ENST00000365114 102 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 RNU6-306P-201ENST00000384617 107 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 RNU6-95P-201ENST00000384697 107 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AC004386.1-201ENST00000393214 761 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AL157702.1-201ENST00000398764 426 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AL109755.1-201ENST00000401791 649 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AL023284.3-201ENST00000407767 334 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AC097713.2-201ENST00000430199 356 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 USP9YP30-201ENST00000430729 455 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AL389925.1-201ENST00000432257 728 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AL353597.2-202ENST00000434901 373 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 FHP1-201ENST00000442741 703 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AC010733.1-201ENST00000451515 401 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 Z83838.1-202ENST00000456225 839 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 ZNF519P4-201ENST00000514008 125 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 RNU6-120P-201ENST00000516077 103 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AC007991.1-201ENST00000522680 631 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AC018442.3-201ENST00000523025 183 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AP001922.4-201ENST00000526967 290 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 TPRX1P1-201ENST00000557620 319 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 MIR4433B-201ENST00000581329 102 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AC005191.1-201ENST00000603950 358 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AC062022.1-201ENST00000451026 1684 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AL731566.1-201ENST00000620490 1937 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AC233263.6-201ENST00000631132 1963 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AC011978.2-201ENST00000569835 2054 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AC092079.1-201ENST00000558620 1985 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AC010624.4-201ENST00000597606 1351 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AL122126.1-201ENST00000546905 1318 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 Y_RNA.106-201ENST00000363189 100 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 RNU6-472P-201ENST00000384299 107 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 MIR188-201ENST00000385034 86 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 GCNT1P4-201ENST00000404096 329 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AC096664.2-201ENST00000411843 406 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 RPL21P50-201ENST00000417698 477 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 RPL7P37-201ENST00000425095 738 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AC093106.2-201ENST00000428212 385 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AL360081.1-201ENST00000428299 555 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 MTND5P15-201ENST00000434246 349 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AL451136.1-201ENST00000435399 325 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AC127537.2-201ENST00000439258 465 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 EIF5AP4-201ENST00000441206 465 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AC073910.1-201ENST00000445047 438 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 snoU13.7-201ENST00000459220 104 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AC135721.1-201ENST00000497954 479 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 RNU6-182P-201ENST00000516970 105 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 Y_RNA.715-201ENST00000517082 110 ntBASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HRH3Q9Y5N1 AP003385.6-201ENST00000531603 374 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms