Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AL451086.1-201ENST00000605596 223 ntBASIC4.94□□□□□ -1.62
CDK5RAP3Q96JB5 AC019193.2-201ENST00000610012 634 ntBASIC4.94□□□□□ -1.62
CDK5RAP3Q96JB5 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.94□□□□□ -1.62
CDK5RAP3Q96JB5 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.94□□□□□ -1.62
CDK5RAP3Q96JB5 MIR4496-201ENST00000635896 61 ntBASIC4.94□□□□□ -1.62
CDK5RAP3Q96JB5 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.94□□□□□ -1.62
CDK5RAP3Q96JB5 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CDK5RAP3Q96JB5 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
CDK5RAP3Q96JB5 OR11H5P-202ENST00000641612 1325 ntBASIC4.94□□□□□ -1.62
CDK5RAP3Q96JB5 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CDK5RAP3Q96JB5 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CDK5RAP3Q96JB5 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
CDK5RAP3Q96JB5 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CDK5RAP3Q96JB5 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 PNPT1P2-201ENST00000456768 2050 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 MTND4P16-201ENST00000466108 1367 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 DDX43P2-201ENST00000604753 1354 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AC018529.3-201ENST00000624212 2254 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 RNU1-130P-201ENST00000363930 160 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 SNORA51.6-201ENST00000384151 125 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 Y_RNA.553-201ENST00000384670 102 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 SSXP10-201ENST00000402595 565 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AL138880.1-201ENST00000405824 642 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AL356387.2-201ENST00000422272 243 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 PDSS1P1-201ENST00000422953 1114 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AL049610.1-201ENST00000423374 372 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 OR51AB1P-201ENST00000429046 620 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 PSMA2P3-201ENST00000429685 675 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AL353706.1-201ENST00000436728 494 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AC114495.1-201ENST00000441274 436 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AL831737.1-201ENST00000441288 271 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 TRIM60P18-201ENST00000441518 828 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 MTCO3P7-201ENST00000510008 774 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AC021146.3-201ENST00000511911 260 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AC104057.1-201ENST00000515547 497 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AC134698.5-201ENST00000519444 336 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AC006362.1-201ENST00000567392 174 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AC234771.5-201ENST00000600161 514 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AC128687.1-201ENST00000605304 619 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AP002907.1-201ENST00000606361 1430 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AC103591.3-201ENST00000608684 209 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AC090425.2-201ENST00000608818 501 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AC012360.2-201ENST00000609349 391 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 MIR6891-201ENST00000618788 93 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 AC011978.2-201ENST00000569835 2054 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 PABPC1P9-201ENST00000426076 1612 ntBASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.93□□□□□ -1.62
CDK5RAP3Q96JB5 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 ELL2P4-201ENST00000446870 1376 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AL031985.3-201ENST00000565390 2449 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AC008033.1-201ENST00000216407 1162 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 ENSAP1-201ENST00000392855 326 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AC016769.3-201ENST00000396562 315 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 ARF4P3-201ENST00000397387 509 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 VN1R8P-201ENST00000407739 893 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 RN7SKP167-201ENST00000411047 285 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 RPL7P30-201ENST00000420888 709 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 CYCSP46-201ENST00000423569 204 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AL132765.1-201ENST00000434165 553 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 EPS15P1-201ENST00000448836 336 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 RN7SL738P-201ENST00000470264 297 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 TMEM251P1-201ENST00000503717 318 ntBASIC4.92□□□□□ -1.62
CDK5RAP3Q96JB5 AC016065.2-201ENST00000514530 444 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms