Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RN7SL20P-201ENST00000488827 297 ntBASIC2.72□□□□□ -1.97
CCDC58Q4VC31 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC58Q4VC31 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC58Q4VC31 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC58Q4VC31 ELOCP31-201ENST00000540463 467 ntBASIC2.72□□□□□ -1.97
CCDC58Q4VC31 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC58Q4VC31 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
CCDC58Q4VC31 MIR4700-201ENST00000578311 74 ntBASIC2.72□□□□□ -1.97
CCDC58Q4VC31 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC58Q4VC31 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.72□□□□□ -1.97
CCDC58Q4VC31 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC58Q4VC31 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC58Q4VC31 AC022509.4-201ENST00000621404 572 ntBASIC2.72□□□□□ -1.97
CCDC58Q4VC31 AL121594.5-201ENST00000631724 573 ntBASIC2.72□□□□□ -1.97
CCDC58Q4VC31 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC58Q4VC31 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC58Q4VC31 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.97
CCDC58Q4VC31 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
CCDC58Q4VC31 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC58Q4VC31 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC58Q4VC31 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC58Q4VC31 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC58Q4VC31 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC58Q4VC31 SNORA14A-201ENST00000364773 135 ntBASIC2.71□□□□□ -1.98
CCDC58Q4VC31 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
CCDC58Q4VC31 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC58Q4VC31 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC58Q4VC31 SNORD15B-201ENST00000384714 146 ntBASIC2.71□□□□□ -1.98
CCDC58Q4VC31 RNU2-6P-201ENST00000411404 190 ntBASIC2.71□□□□□ -1.98
CCDC58Q4VC31 AC092638.1-201ENST00000411966 1275 ntBASIC2.71□□□□□ -1.98
CCDC58Q4VC31 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC58Q4VC31 NIPA2P1-201ENST00000426223 976 ntBASIC2.71□□□□□ -1.98
CCDC58Q4VC31 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC58Q4VC31 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC58Q4VC31 AL445584.1-201ENST00000431451 330 ntBASIC2.71□□□□□ -1.98
CCDC58Q4VC31 AC005019.1-201ENST00000436455 431 ntBASIC2.71□□□□□ -1.98
CCDC58Q4VC31 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC58Q4VC31 Z99714.1-201ENST00000450463 807 ntBASIC2.71□□□□□ -1.98
CCDC58Q4VC31 AP000705.1-201ENST00000454567 350 ntBASIC2.71□□□□□ -1.98
CCDC58Q4VC31 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC58Q4VC31 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC58Q4VC31 RPS29P12-201ENST00000460178 152 ntBASIC2.71□□□□□ -1.98
CCDC58Q4VC31 AP000852.1-201ENST00000472460 573 ntBASIC2.71□□□□□ -1.98
CCDC58Q4VC31 RPS17P11-201ENST00000474297 293 ntBASIC2.71□□□□□ -1.98
CCDC58Q4VC31 AC009901.1-201ENST00000506703 541 ntBASIC2.71□□□□□ -1.98
CCDC58Q4VC31 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC2.71□□□□□ -1.98
CCDC58Q4VC31 RPL7L1P13-201ENST00000511702 739 ntBASIC2.71□□□□□ -1.98
CCDC58Q4VC31 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.71□□□□□ -1.98
CCDC58Q4VC31 DNAJC8P1-201ENST00000554535 372 ntBASIC2.71□□□□□ -1.98
CCDC58Q4VC31 RPL21P12-201ENST00000559810 515 ntBASIC2.71□□□□□ -1.98
CCDC58Q4VC31 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC58Q4VC31 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC58Q4VC31 AL355365.1-201ENST00000616480 294 ntBASIC2.71□□□□□ -1.98
CCDC58Q4VC31 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC58Q4VC31 AP003122.6-201ENST00000623831 495 ntBASIC2.71□□□□□ -1.98
CCDC58Q4VC31 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC58Q4VC31 MIR622-201ENST00000638396 96 ntBASIC2.71□□□□□ -1.98
CCDC58Q4VC31 AC119674.1-212ENST00000641155 993 ntBASIC2.71□□□□□ -1.98
CCDC58Q4VC31 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CCDC58Q4VC31 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
CCDC58Q4VC31 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC58Q4VC31 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC58Q4VC31 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC58Q4VC31 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.7□□□□□ -1.98
CCDC58Q4VC31 RNU6-50P-201ENST00000362356 103 ntBASIC2.7□□□□□ -1.98
CCDC58Q4VC31 AL590290.1-201ENST00000405336 380 ntBASIC2.7□□□□□ -1.98
CCDC58Q4VC31 RNU6ATAC-201ENST00000408749 126 ntBASIC2.7□□□□□ -1.98
CCDC58Q4VC31 RAB9AP3-201ENST00000412737 573 ntBASIC2.7□□□□□ -1.98
CCDC58Q4VC31 HSFY4P-201ENST00000415994 1181 ntBASIC2.7□□□□□ -1.98
CCDC58Q4VC31 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC58Q4VC31 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC58Q4VC31 AC007389.2-201ENST00000434630 306 ntBASIC2.7□□□□□ -1.98
CCDC58Q4VC31 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC58Q4VC31 RAB9AP1-201ENST00000449393 573 ntBASIC2.7□□□□□ -1.98
CCDC58Q4VC31 TPMTP4-201ENST00000450749 678 ntBASIC2.7□□□□□ -1.98
CCDC58Q4VC31 AL513343.1-201ENST00000451818 792 ntBASIC2.7□□□□□ -1.98
CCDC58Q4VC31 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC58Q4VC31 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC58Q4VC31 SNORA31.15-201ENST00000516771 132 ntBASIC2.7□□□□□ -1.98
CCDC58Q4VC31 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC58Q4VC31 HMGB1P41-201ENST00000520234 440 ntBASIC2.7□□□□□ -1.98
CCDC58Q4VC31 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.7□□□□□ -1.98
CCDC58Q4VC31 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC58Q4VC31 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC58Q4VC31 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.7□□□□□ -1.98
CCDC58Q4VC31 MIR3160-1-201ENST00000577972 85 ntBASIC2.7□□□□□ -1.98
CCDC58Q4VC31 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC58Q4VC31 VN1R85P-201ENST00000601587 426 ntBASIC2.7□□□□□ -1.98
CCDC58Q4VC31 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC58Q4VC31 AC138932.5-201ENST00000617759 563 ntBASIC2.7□□□□□ -1.98
CCDC58Q4VC31 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC58Q4VC31 AC006111.3-201ENST00000622137 383 ntBASIC2.7□□□□□ -1.98
CCDC58Q4VC31 AC092159.4-201ENST00000624944 550 ntBASIC2.7□□□□□ -1.98
CCDC58Q4VC31 MIR4496-201ENST00000635896 61 ntBASIC2.7□□□□□ -1.98
CCDC58Q4VC31 AL034408.1-202ENST00000636088 415 ntBASIC2.7□□□□□ -1.98
CCDC58Q4VC31 FO624990.1-201ENST00000636373 85 ntBASIC2.7□□□□□ -1.98
CCDC58Q4VC31 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC58Q4VC31 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC58Q4VC31 MTCO1P24-201ENST00000515438 1558 ntBASIC2.7□□□□□ -1.98
CCDC58Q4VC31 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms