Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CCSER1Q9C0I3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 MIR30E-201ENST00000362104 92 ntBASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 RNU6-444P-201ENST00000383988 108 ntBASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 RNU6-55P-201ENST00000411092 107 ntBASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 RNU6-954P-201ENST00000411355 107 ntBASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 AC008280.1-201ENST00000418851 412 ntBASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 AL590762.3-201ENST00000436372 640 ntBASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 AC092641.1-201ENST00000440229 772 ntBASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 RPL21P23-201ENST00000446654 460 ntBASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 AC110768.1-201ENST00000509222 400 ntBASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 AC016065.2-201ENST00000514530 444 ntBASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 HIGD1AP3-201ENST00000515857 278 ntBASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 MIR2276-201ENST00000516886 89 ntBASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 IGKV2-23-201ENST00000518729 323 ntBASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 AC093510.2-201ENST00000562820 896 ntBASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 AC074050.1-201ENST00000563247 211 ntBASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 AC092354.2-201ENST00000607786 514 ntBASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 U7.8-201ENST00000619968 63 ntBASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 AC092628.2-201ENST00000622492 339 ntBASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 AC097372.4-201ENST00000625025 466 ntBASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 MTCO1P4-201ENST00000520516 1409 ntBASIC3.87□□□□□ -1.79
CCSER1Q9C0I3 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 MIR184-201ENST00000384962 84 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 SNORD17-201ENST00000390930 237 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 TMSB4XP8-201ENST00000402089 135 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 SSXP10-201ENST00000402595 565 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 RNU2-37P-201ENST00000410695 177 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 TMSB4XP6-201ENST00000415187 135 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 RPS3AP9-201ENST00000417027 792 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 TMSB4XP1-201ENST00000424567 135 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 HMGN2P31-201ENST00000432430 273 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 YWHAZP8-201ENST00000436935 731 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 AL929288.2-201ENST00000446368 407 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 GTF2IP12-201ENST00000456547 356 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 RPS27P23-201ENST00000487608 251 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 OR8K4P-201ENST00000534608 872 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 AC010928.3-201ENST00000587712 541 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 BNIP3P33-201ENST00000598912 569 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 YWHAQP7-201ENST00000603536 658 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 AL365503.1-201ENST00000605247 905 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 MIR8084-201ENST00000614105 89 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 AC243312.2-201ENST00000623340 601 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 AL356118.1-201ENST00000635272 1078 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 MIR4278-201ENST00000636094 69 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 AC244258.1-201ENST00000637553 1071 ntBASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
CCSER1Q9C0I3 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.85□□□□□ -1.79
CCSER1Q9C0I3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms