Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 SNORA9.2-201ENST00000365361 133 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 MIR504-201ENST00000385065 83 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 NPM1P11-201ENST00000417106 855 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 AL450263.2-201ENST00000439400 589 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 RNA5SP356-201ENST00000515972 94 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 Y_RNA.676-201ENST00000516393 96 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 RNA5SP367-201ENST00000516557 118 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 AC009812.2-201ENST00000517657 457 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 VN1R78P-201ENST00000597393 564 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 RPL12P50-201ENST00000603116 116 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 AC245100.7-201ENST00000609678 442 ntBASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.03□□□□□ -1.92
SHROOM3Q8TF72 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 AL356057.1-202ENST00000402263 756 ntBASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 ATP5F1P6-201ENST00000402768 767 ntBASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 AC013470.3-201ENST00000420252 1194 ntBASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 RAD1P2-201ENST00000446414 663 ntBASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 ELOCP23-201ENST00000452014 332 ntBASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 OR9N1P-201ENST00000491296 333 ntBASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 OR5G4P-201ENST00000525251 760 ntBASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 MIR4435-1-201ENST00000582552 80 ntBASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 FAM60CP-201ENST00000591086 664 ntBASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 AC024153.1-201ENST00000603103 365 ntBASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 AC092435.3-201ENST00000565538 3654 ntBASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 AC093909.5-201ENST00000621839 1799 ntBASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 AC096644.4-201ENST00000563417 2912 ntBASIC3.02□□□□□ -1.93
SHROOM3Q8TF72 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 AL590623.1-201ENST00000427864 105 ntBASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 MTND6P18-201ENST00000439477 513 ntBASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 AC099063.2-201ENST00000446360 662 ntBASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 FAM172BP-201ENST00000487497 1089 ntBASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 OR4C2P-201ENST00000530855 1064 ntBASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 AC012467.1-201ENST00000607740 256 ntBASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 AC108206.1-201ENST00000570186 4159 ntBASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 OR13C3-201ENST00000374781 1108 ntBASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 AC019155.1-201ENST00000382242 574 ntBASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 RPS15AP6-201ENST00000420703 385 ntBASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 AL159169.1-201ENST00000421119 127 ntBASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 RPL21P112-201ENST00000434403 463 ntBASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 AC016696.1-201ENST00000446949 318 ntBASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 RAB28P3-201ENST00000448325 597 ntBASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 NIPA2P5-201ENST00000452282 464 ntBASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 snoU13.15-201ENST00000459407 104 ntBASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 RPS3AP43-201ENST00000479743 781 ntBASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 AL035404.1-201ENST00000497982 568 ntBASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 AC034159.1-201ENST00000513885 583 ntBASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 AC004825.2-201ENST00000616634 455 ntBASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 ASNSP3-201ENST00000451989 1306 ntBASIC3.01□□□□□ -1.93
SHROOM3Q8TF72 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3□□□□□ -1.93
SHROOM3Q8TF72 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SHROOM3Q8TF72 RNU6-386P-201ENST00000362650 107 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 RN7SKP220-201ENST00000410611 288 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3□□□□□ -1.93
SHROOM3Q8TF72 AL392003.1-201ENST00000434394 243 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 MRPS33P4-201ENST00000434892 317 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3□□□□□ -1.93
SHROOM3Q8TF72 RAB9AP5-201ENST00000437794 597 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 Z99127.2-201ENST00000441426 334 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 AC112653.1-201ENST00000443851 386 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 RAB9AP2-201ENST00000443911 597 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 NPM1P13-201ENST00000452663 865 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 UBL5P3-201ENST00000475112 231 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3□□□□□ -1.93
SHROOM3Q8TF72 TXNP6-201ENST00000510190 310 ntBASIC3□□□□□ -1.93
SHROOM3Q8TF72 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms