Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC090229.1-201ENST00000590983 1609 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AC007390.2-201ENST00000606229 3803 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 RNU6-444P-201ENST00000383988 108 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 MIR200C-201ENST00000384980 68 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 SNORA48.7-201ENST00000391302 135 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 TMSB4XP8-201ENST00000402089 135 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 TMSB4XP6-201ENST00000415187 135 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AC008280.1-201ENST00000418851 412 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 DBIP2-201ENST00000419076 262 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 RPS15AP40-201ENST00000419621 391 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 TMSB4XP1-201ENST00000424567 135 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 SDCBPP2-201ENST00000424643 885 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 UBE2V1P1-201ENST00000430836 445 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 MTCO1P53-201ENST00000441633 699 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AC073387.1-201ENST00000453261 709 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 MRPL42P4-201ENST00000453267 443 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 SNORD105B-201ENST00000458770 79 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 RPL37P6-202ENST00000464216 403 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AC104164.3-201ENST00000467363 1258 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 GAPDHP39-201ENST00000481866 979 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 RPL21P129-201ENST00000491732 478 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AC048346.1-201ENST00000510247 144 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 SCARNA1-201ENST00000517138 166 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AP001207.1-201ENST00000524051 481 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 DEFB130C-202ENST00000530001 230 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 MIR4504-201ENST00000577413 92 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 MIR4429-201ENST00000580105 73 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AC010591.1-201ENST00000603941 649 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AC006077.1-201ENST00000604746 343 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 SNORA51-201ENST00000606420 132 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AC069209.1-201ENST00000619282 651 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 FAM157B-203ENST00000639350 358 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 AL732372.2-225ENST00000642124 456 ntBASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.33□□□□□ -1.88
C9orf40Q8IXQ3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 RNU6-224P-201ENST00000384055 107 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 MTCO1P56-201ENST00000401674 224 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 AL449283.1-202ENST00000418249 604 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 OSTCP5-201ENST00000425293 453 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 CYCSP4-201ENST00000429682 331 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 GTF2IP3-201ENST00000433887 494 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 HSPD1P21-201ENST00000436541 245 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 Z99714.1-201ENST00000450463 807 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 MTCO3P16-201ENST00000454456 754 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 NF1P3-201ENST00000457709 450 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 AP000893.1-201ENST00000474462 794 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 AC087385.1-201ENST00000475062 312 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 AC079203.1-201ENST00000487972 404 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 RN7SKP13-201ENST00000515933 244 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 IGKV2D-19-201ENST00000523346 262 ntBASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.32□□□□□ -1.88
C9orf40Q8IXQ3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms