Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 AL162713.1-201ENST00000604480 262 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 AC073657.2-201ENST00000605661 303 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 AC242628.1-201ENST00000606810 391 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 AC092354.2-201ENST00000607786 514 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 U1.23-201ENST00000610293 146 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 CR589904.2-201ENST00000612533 440 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 RNU1-68P-201ENST00000615382 146 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 AL355365.1-201ENST00000616480 294 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 AL162233.1-201ENST00000620014 944 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 U1.39-201ENST00000621562 146 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 AL049781.1-201ENST00000623195 3585 ntBASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CDKL3Q8IVW4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 MTCO1P24-201ENST00000515438 1558 ntBASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 RNA5SP119-201ENST00000362715 117 ntBASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 AL355379.1-201ENST00000405542 640 ntBASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 RNU2-65P-201ENST00000410162 185 ntBASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 RNU2-71P-201ENST00000411395 189 ntBASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 BX323014.1-201ENST00000412876 237 ntBASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 AC245052.5-201ENST00000416320 649 ntBASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 VDAC1P3-201ENST00000434069 851 ntBASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 RPL23AP22-201ENST00000437556 453 ntBASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 AL358232.1-201ENST00000448030 501 ntBASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 TXNP6-201ENST00000510190 310 ntBASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 RN7SKP277-201ENST00000516895 283 ntBASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 AC006518.1-201ENST00000541449 943 ntBASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 NOP56P3-201ENST00000549457 385 ntBASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 SNRPGP15-201ENST00000600149 222 ntBASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 AL591516.1-201ENST00000611326 274 ntBASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CDKL3Q8IVW4 ELL2P4-201ENST00000446870 1376 ntBASIC3.34□□□□□ -1.88
CDKL3Q8IVW4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
CDKL3Q8IVW4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
CDKL3Q8IVW4 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.34□□□□□ -1.88
CDKL3Q8IVW4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 MIR200C-201ENST00000384980 68 ntBASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 MTND3P20-201ENST00000407663 186 ntBASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 RNA5SP293-201ENST00000410527 113 ntBASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 PSMA2P3-201ENST00000429685 675 ntBASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 RPL7P52-201ENST00000449200 742 ntBASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 SSXP4-201ENST00000451349 245 ntBASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 AL513343.1-201ENST00000451818 792 ntBASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 RNU6-362P-201ENST00000516736 90 ntBASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 AP001207.2-201ENST00000519490 539 ntBASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 AC007458.1-201ENST00000542812 373 ntBASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 HIGD1AP1-201ENST00000550979 275 ntBASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 AC005951.1-201ENST00000576706 485 ntBASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 AC009948.4-201ENST00000604692 675 ntBASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 MAPK10-362ENST00000641864 4484 ntBASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.33□□□□□ -1.88
CDKL3Q8IVW4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 SRP72P2-201ENST00000344851 1979 ntBASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 RNU2-6P-201ENST00000411404 190 ntBASIC3.32□□□□□ -1.88
CDKL3Q8IVW4 AC010385.1-201ENST00000412374 256 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms