Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RANP9-201ENST00000519957 271 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 NDUFB9P3-201ENST00000521269 501 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 IGKV2D-19-201ENST00000523346 262 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 MED28P5-201ENST00000528254 438 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.11□□□□□ -1.91
CX3CR1P49238 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.11□□□□□ -1.91
CX3CR1P49238 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.11□□□□□ -1.91
CX3CR1P49238 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC3.11□□□□□ -1.91
CX3CR1P49238 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.11□□□□□ -1.91
CX3CR1P49238 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.11□□□□□ -1.91
CX3CR1P49238 AL513477.2-201ENST00000607858 568 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 MIR8058-201ENST00000615737 89 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 AC069209.1-201ENST00000619282 651 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 PLCE1P1-201ENST00000622094 305 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 AC068724.3-201ENST00000625906 87 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CX3CR1P49238 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CX3CR1P49238 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CX3CR1P49238 AC073055.1-201ENST00000456901 1621 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 AC138915.3-201ENST00000562908 1389 ntBASIC3.11□□□□□ -1.91
CX3CR1P49238 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CX3CR1P49238 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CX3CR1P49238 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CX3CR1P49238 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
CX3CR1P49238 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.1□□□□□ -1.91
CX3CR1P49238 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CX3CR1P49238 RNVU1-3-201ENST00000364313 161 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 RNU6-339P-201ENST00000384310 107 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 MIR649-201ENST00000384843 97 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 SNORD65C-201ENST00000390962 71 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 AC007066.1-201ENST00000392902 381 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 SKINT1L-201ENST00000401057 817 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CX3CR1P49238 RNA5SP129-201ENST00000410276 118 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 AC068533.1-201ENST00000418542 415 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.1□□□□□ -1.91
CX3CR1P49238 MTATP6P11-201ENST00000428071 670 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.1□□□□□ -1.91
CX3CR1P49238 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CX3CR1P49238 RPS3AP46-201ENST00000448352 682 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 HMGB1P15-201ENST00000453854 435 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 NECAP1P2-201ENST00000455668 727 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 RPL21P104-201ENST00000464143 478 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 AC023598.1-201ENST00000472521 361 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 AC020893.1-201ENST00000502452 580 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.1□□□□□ -1.91
CX3CR1P49238 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.1□□□□□ -1.91
CX3CR1P49238 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.1□□□□□ -1.91
CX3CR1P49238 AP006245.1-201ENST00000522549 120 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 OR8K2P-201ENST00000524645 927 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CX3CR1P49238 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CX3CR1P49238 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.1□□□□□ -1.91
CX3CR1P49238 DUXAP6-201ENST00000553858 601 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.1□□□□□ -1.91
CX3CR1P49238 AC012182.1-201ENST00000570133 895 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 AC074051.3-201ENST00000570238 358 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 AC103881.1-201ENST00000603476 538 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 AL391497.1-201ENST00000608671 547 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 AL450489.1-201ENST00000612071 468 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 AC090116.1-201ENST00000615679 446 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 AL445493.3-201ENST00000619568 477 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 AC022149.2-201ENST00000621061 203 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.1□□□□□ -1.91
CX3CR1P49238 AC006963.1-201ENST00000624003 1052 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 AC098679.5-201ENST00000624394 571 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CX3CR1P49238 AC119674.1-207ENST00000641355 633 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
CX3CR1P49238 MTND4P34-201ENST00000572715 1371 ntBASIC3.1□□□□□ -1.91
CX3CR1P49238 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.1□□□□□ -1.91
CX3CR1P49238 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CX3CR1P49238 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.09□□□□□ -1.91
CX3CR1P49238 AC010733.2-201ENST00000589496 5702 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.09□□□□□ -1.91
CX3CR1P49238 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.09□□□□□ -1.91
CX3CR1P49238 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.09□□□□□ -1.91
CX3CR1P49238 AC117529.2-201ENST00000512159 2068 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CX3CR1P49238 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CX3CR1P49238 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CX3CR1P49238 RNU6-805P-201ENST00000365643 106 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 SNORD3H-201ENST00000384486 214 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 U8.11-201ENST00000384699 133 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 U8.12-201ENST00000384701 133 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.09□□□□□ -1.91
CX3CR1P49238 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.09□□□□□ -1.91
CX3CR1P49238 AC246680.2-201ENST00000422106 389 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 AC233981.1-201ENST00000423224 461 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.09□□□□□ -1.91
CX3CR1P49238 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.09□□□□□ -1.91
CX3CR1P49238 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.09□□□□□ -1.91
CX3CR1P49238 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.09□□□□□ -1.91
CX3CR1P49238 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.09□□□□□ -1.91
CX3CR1P49238 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.09□□□□□ -1.91
CX3CR1P49238 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CX3CR1P49238 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.09□□□□□ -1.91
CX3CR1P49238 U8.18-201ENST00000459285 133 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 RN7SL330P-201ENST00000469709 307 ntBASIC3.09□□□□□ -1.91
CX3CR1P49238 RN7SL594P-201ENST00000470590 287 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms