Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CXCL1P09341 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.36□□□□□ -2.03
CXCL1P09341 ARL5AP3-201ENST00000439327 386 ntBASIC2.36□□□□□ -2.03
CXCL1P09341 AC069540.1-201ENST00000446320 988 ntBASIC2.36□□□□□ -2.03
CXCL1P09341 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CXCL1P09341 NECAP1P2-201ENST00000455668 727 ntBASIC2.36□□□□□ -2.03
CXCL1P09341 RPL21P13-201ENST00000488305 481 ntBASIC2.36□□□□□ -2.03
CXCL1P09341 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.36□□□□□ -2.03
CXCL1P09341 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CXCL1P09341 RNU1-61P-201ENST00000516107 151 ntBASIC2.36□□□□□ -2.03
CXCL1P09341 SNORD59.2-201ENST00000516873 68 ntBASIC2.36□□□□□ -2.03
CXCL1P09341 AC067904.2-201ENST00000517322 1283 ntBASIC2.36□□□□□ -2.03
CXCL1P09341 IGKV2-26-201ENST00000518305 343 ntBASIC2.36□□□□□ -2.03
CXCL1P09341 AC025881.1-201ENST00000518851 512 ntBASIC2.36□□□□□ -2.03
CXCL1P09341 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.36□□□□□ -2.03
CXCL1P09341 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CXCL1P09341 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CXCL1P09341 MIR3670-2-201ENST00000582974 65 ntBASIC2.36□□□□□ -2.03
CXCL1P09341 MIR3670-1-201ENST00000584160 65 ntBASIC2.36□□□□□ -2.03
CXCL1P09341 MIR3670-3-201ENST00000584855 65 ntBASIC2.36□□□□□ -2.03
CXCL1P09341 ZNF92P3-201ENST00000596594 954 ntBASIC2.36□□□□□ -2.03
CXCL1P09341 MIR3670-4-201ENST00000612260 65 ntBASIC2.36□□□□□ -2.03
CXCL1P09341 AC004696.1-201ENST00000614345 607 ntBASIC2.36□□□□□ -2.03
CXCL1P09341 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC2.36□□□□□ -2.03
CXCL1P09341 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.36□□□□□ -2.03
CXCL1P09341 AC090617.7-201ENST00000623952 126 ntBASIC2.36□□□□□ -2.03
CXCL1P09341 FRG1DP-201ENST00000635586 771 ntBASIC2.36□□□□□ -2.03
CXCL1P09341 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.36□□□□□ -2.03
CXCL1P09341 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.36□□□□□ -2.03
CXCL1P09341 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.36□□□□□ -2.03
CXCL1P09341 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CXCL1P09341 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CXCL1P09341 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CXCL1P09341 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
CXCL1P09341 SNORD3H-201ENST00000384486 214 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 AL354719.1-201ENST00000406535 843 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 RNU2-65P-201ENST00000410162 185 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.35□□□□□ -2.03
CXCL1P09341 AL096701.2-201ENST00000416920 238 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 TOMM22P1-201ENST00000418578 312 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.35□□□□□ -2.03
CXCL1P09341 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.35□□□□□ -2.03
CXCL1P09341 HSPE1P1-201ENST00000421494 318 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.35□□□□□ -2.03
CXCL1P09341 RPL21P66-201ENST00000426566 466 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 AC109583.1-201ENST00000432156 268 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CXCL1P09341 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC2.35□□□□□ -2.03
CXCL1P09341 RPS29P7-201ENST00000439662 171 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.35□□□□□ -2.03
CXCL1P09341 Z77249.1-201ENST00000444622 1175 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC2.35□□□□□ -2.03
CXCL1P09341 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.35□□□□□ -2.03
CXCL1P09341 AC090525.1-201ENST00000479116 478 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 MTND3P6-201ENST00000485242 339 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.35□□□□□ -2.03
CXCL1P09341 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.35□□□□□ -2.03
CXCL1P09341 AL024509.2-201ENST00000493462 493 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CXCL1P09341 NPM1P41-201ENST00000512920 831 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 MTND5P4-201ENST00000514978 288 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 HIGD1AP3-201ENST00000515857 278 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 SCARNA13-201ENST00000516672 275 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.35□□□□□ -2.03
CXCL1P09341 HMGB1P41-201ENST00000520234 440 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.35□□□□□ -2.03
CXCL1P09341 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.35□□□□□ -2.03
CXCL1P09341 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC2.35□□□□□ -2.03
CXCL1P09341 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.35□□□□□ -2.03
CXCL1P09341 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.35□□□□□ -2.03
CXCL1P09341 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.35□□□□□ -2.03
CXCL1P09341 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.35□□□□□ -2.03
CXCL1P09341 AL031985.2-201ENST00000600955 480 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 AC135803.1-201ENST00000608748 565 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 AC117490.2-201ENST00000610042 594 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.35□□□□□ -2.03
CXCL1P09341 AC231759.1-201ENST00000616455 597 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC2.35□□□□□ -2.03
CXCL1P09341 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
CXCL1P09341 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
CXCL1P09341 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
CXCL1P09341 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.35□□□□□ -2.03
CXCL1P09341 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.34□□□□□ -2.03
CXCL1P09341 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CXCL1P09341 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
CXCL1P09341 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CXCL1P09341 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CXCL1P09341 RNU4-31P-201ENST00000384211 141 ntBASIC2.34□□□□□ -2.03
CXCL1P09341 MIR181A2-201ENST00000384863 110 ntBASIC2.34□□□□□ -2.03
CXCL1P09341 AC110754.1-201ENST00000399740 601 ntBASIC2.34□□□□□ -2.03
CXCL1P09341 AL139095.1-201ENST00000404326 391 ntBASIC2.34□□□□□ -2.03
CXCL1P09341 BTBD10P2-201ENST00000404779 676 ntBASIC2.34□□□□□ -2.03
CXCL1P09341 HMGN2P35-201ENST00000412164 270 ntBASIC2.34□□□□□ -2.03
CXCL1P09341 MTCO3P4-201ENST00000419236 787 ntBASIC2.34□□□□□ -2.03
CXCL1P09341 OR51AB1P-201ENST00000429046 620 ntBASIC2.34□□□□□ -2.03
CXCL1P09341 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CXCL1P09341 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.34□□□□□ -2.03
CXCL1P09341 ELOCP13-201ENST00000443934 329 ntBASIC2.34□□□□□ -2.03
CXCL1P09341 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC2.34□□□□□ -2.03
CXCL1P09341 AC008155.2-201ENST00000464337 397 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms