Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC004009.2-201ENST00000623016 728 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 AF246928.1-201ENST00000623768 87 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 AL356596.1-201ENST00000624230 379 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.58□□□□□ -1.84
CX3CL1P78423 AC099063.3-201ENST00000642066 185 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 DHX40P1-201ENST00000588725 1412 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
CX3CL1P78423 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CX3CL1P78423 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CX3CL1P78423 AC012618.3-205ENST00000637896 1496 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 LINC00622-201ENST00000562811 1570 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CX3CL1P78423 AC139769.1-204ENST00000472297 1931 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.58□□□□□ -1.84
CX3CL1P78423 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CX3CL1P78423 MFSD8-242ENST00000641690 4199 ntBASIC3.58□□□□□ -1.84
CX3CL1P78423 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.57□□□□□ -1.84
CX3CL1P78423 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
CX3CL1P78423 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CX3CL1P78423 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CX3CL1P78423 RNU6-777P-201ENST00000364265 104 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 RNA5SP22-201ENST00000365393 109 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CX3CL1P78423 SNORD116-2-201ENST00000384274 95 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 SNORD116-6-201ENST00000384711 96 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 MIR659-201ENST00000384963 97 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 AL031679.1-201ENST00000400616 525 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 AC136624.1-201ENST00000400791 413 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.57□□□□□ -1.84
CX3CL1P78423 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.57□□□□□ -1.84
CX3CL1P78423 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.57□□□□□ -1.84
CX3CL1P78423 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.57□□□□□ -1.84
CX3CL1P78423 RWDD4P2-201ENST00000426392 563 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 NANOGP6-201ENST00000429190 847 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 ELOCP18-201ENST00000434209 337 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 UBE2FP3-201ENST00000436366 524 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 SNRPEP7-201ENST00000438350 220 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 MTND5P14-201ENST00000441481 1267 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.57□□□□□ -1.84
CX3CL1P78423 ARL2BPP10-201ENST00000446487 531 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.57□□□□□ -1.84
CX3CL1P78423 AL162388.1-201ENST00000450912 352 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.57□□□□□ -1.84
CX3CL1P78423 AC097262.1-201ENST00000452559 548 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.57□□□□□ -1.84
CX3CL1P78423 BX322784.1-201ENST00000455793 1077 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.57□□□□□ -1.84
CX3CL1P78423 RPL7P1-201ENST00000468161 747 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 RPL7P9-201ENST00000468715 747 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 RPL31P50-201ENST00000471002 296 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 SYPL1P1-201ENST00000473622 768 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 AC090013.1-201ENST00000485147 480 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 RPL23AP72-201ENST00000492447 435 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 RPS6P4-201ENST00000494693 758 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.57□□□□□ -1.84
CX3CL1P78423 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.57□□□□□ -1.84
CX3CL1P78423 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.57□□□□□ -1.84
CX3CL1P78423 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.57□□□□□ -1.84
CX3CL1P78423 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.57□□□□□ -1.84
CX3CL1P78423 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.57□□□□□ -1.84
CX3CL1P78423 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.57□□□□□ -1.84
CX3CL1P78423 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.57□□□□□ -1.84
CX3CL1P78423 AC090281.1-201ENST00000523019 276 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.57□□□□□ -1.84
CX3CL1P78423 AC087276.1-201ENST00000529659 480 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.57□□□□□ -1.84
CX3CL1P78423 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CX3CL1P78423 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC3.57□□□□□ -1.84
CX3CL1P78423 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.57□□□□□ -1.84
CX3CL1P78423 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CX3CL1P78423 AC073429.2-201ENST00000569694 1444 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.57□□□□□ -1.84
CX3CL1P78423 AC136618.2-201ENST00000575091 400 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 AC011260.1-201ENST00000578420 472 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CX3CL1P78423 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.57□□□□□ -1.84
CX3CL1P78423 AC013444.2-201ENST00000603317 787 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.57□□□□□ -1.84
CX3CL1P78423 HMGN2P28-201ENST00000606102 262 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.57□□□□□ -1.84
CX3CL1P78423 AC006329.2-201ENST00000611491 394 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 U73479.1-201ENST00000618062 168 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.57□□□□□ -1.84
CX3CL1P78423 RMST_9.1-201ENST00000619945 193 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 AP005019.3-201ENST00000620418 560 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 AC025031.4-201ENST00000621248 3271 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CX3CL1P78423 AL356121.2-201ENST00000624715 780 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 PCMTD1P7-201ENST00000634506 357 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CX3CL1P78423 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.57□□□□□ -1.84
CX3CL1P78423 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CX3CL1P78423 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.57□□□□□ -1.84
CX3CL1P78423 AL136964.1-201ENST00000622038 2990 ntBASIC3.57□□□□□ -1.84
CX3CL1P78423 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CX3CL1P78423 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms