Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 OR4K6P-201ENST00000416478 897 ntBASIC3.29□□□□□ -1.88
SHOX2O60902 AC234782.4-201ENST00000417646 1048 ntBASIC3.29□□□□□ -1.88
SHOX2O60902 RPL7P2-201ENST00000427639 268 ntBASIC3.29□□□□□ -1.88
SHOX2O60902 DPPA2P1-201ENST00000428060 556 ntBASIC3.29□□□□□ -1.88
SHOX2O60902 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.29□□□□□ -1.88
SHOX2O60902 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.29□□□□□ -1.88
SHOX2O60902 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC3.29□□□□□ -1.88
SHOX2O60902 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.29□□□□□ -1.88
SHOX2O60902 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.29□□□□□ -1.88
SHOX2O60902 AC146507.1-201ENST00000468335 354 ntBASIC3.29□□□□□ -1.88
SHOX2O60902 AC005726.1-201ENST00000494679 427 ntBASIC3.29□□□□□ -1.88
SHOX2O60902 AC111193.1-201ENST00000504097 155 ntBASIC3.29□□□□□ -1.88
SHOX2O60902 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.29□□□□□ -1.88
SHOX2O60902 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SHOX2O60902 AC093770.1-201ENST00000511559 571 ntBASIC3.29□□□□□ -1.88
SHOX2O60902 SNORA70.18-201ENST00000516696 98 ntBASIC3.29□□□□□ -1.88
SHOX2O60902 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.29□□□□□ -1.88
SHOX2O60902 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.29□□□□□ -1.88
SHOX2O60902 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.29□□□□□ -1.88
SHOX2O60902 CENPUP2-201ENST00000555897 1186 ntBASIC3.29□□□□□ -1.88
SHOX2O60902 RN7SL703P-201ENST00000578485 302 ntBASIC3.29□□□□□ -1.88
SHOX2O60902 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.29□□□□□ -1.88
SHOX2O60902 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.29□□□□□ -1.88
SHOX2O60902 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.29□□□□□ -1.88
SHOX2O60902 AC078899.3-201ENST00000599065 212 ntBASIC3.29□□□□□ -1.88
SHOX2O60902 AL627309.6-201ENST00000606857 840 ntBASIC3.29□□□□□ -1.88
SHOX2O60902 AC112503.1-201ENST00000608436 391 ntBASIC3.29□□□□□ -1.88
SHOX2O60902 U6.48-201ENST00000618523 106 ntBASIC3.29□□□□□ -1.88
SHOX2O60902 U4.6-201ENST00000621618 127 ntBASIC3.29□□□□□ -1.88
SHOX2O60902 CR392039.5-201ENST00000623201 510 ntBASIC3.29□□□□□ -1.88
SHOX2O60902 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHOX2O60902 FAM35BP-202ENST00000497389 3337 ntBASIC3.29□□□□□ -1.88
SHOX2O60902 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
SHOX2O60902 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SHOX2O60902 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 AF127577.6-201ENST00000623352 2191 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SHOX2O60902 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.28□□□□□ -1.88
SHOX2O60902 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SHOX2O60902 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SHOX2O60902 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHOX2O60902 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
SHOX2O60902 RNA5SP197-201ENST00000363357 119 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 SNORD3H-201ENST00000384486 214 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 HSPE1P26-201ENST00000405341 275 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 AL139281.1-201ENST00000422120 335 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.28□□□□□ -1.88
SHOX2O60902 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SHOX2O60902 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.28□□□□□ -1.88
SHOX2O60902 RPS7P5-201ENST00000441482 581 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 GSTA11P-201ENST00000452866 669 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 AP002345.1-201ENST00000456493 928 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 AL133162.1-201ENST00000463228 453 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 RPS20P21-201ENST00000466859 343 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.28□□□□□ -1.88
SHOX2O60902 RN7SL429P-201ENST00000479090 223 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 RN7SL489P-201ENST00000486185 223 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 RN7SL327P-201ENST00000488659 223 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.28□□□□□ -1.88
SHOX2O60902 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.28□□□□□ -1.88
SHOX2O60902 AC005921.1-201ENST00000510589 286 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 APOOP4-201ENST00000513530 597 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 DUXAP2-201ENST00000519198 589 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.28□□□□□ -1.88
SHOX2O60902 CCNG2P1-201ENST00000549521 1000 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 ZNF192P1-203ENST00000565888 810 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.28□□□□□ -1.88
SHOX2O60902 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.28□□□□□ -1.88
SHOX2O60902 AC053481.4-201ENST00000583164 216 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.28□□□□□ -1.88
SHOX2O60902 AC110792.4-201ENST00000609843 298 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 uc_338.1-201ENST00000612113 180 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SHOX2O60902 RN7SL853P-201ENST00000617250 223 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 AC121761.2-201ENST00000617300 689 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SHOX2O60902 MIR6864-201ENST00000617935 70 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 AP004607.9-201ENST00000618202 316 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 AL359757.2-201ENST00000624309 274 ntBASIC3.28□□□□□ -1.88
SHOX2O60902 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
SHOX2O60902 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.28□□□□□ -1.88
SHOX2O60902 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SHOX2O60902 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
SHOX2O60902 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHOX2O60902 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SHOX2O60902 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.27□□□□□ -1.89
SHOX2O60902 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
SHOX2O60902 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.27□□□□□ -1.89
SHOX2O60902 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
SHOX2O60902 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SHOX2O60902 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SHOX2O60902 AC092447.7-201ENST00000422212 1621 ntBASIC3.27□□□□□ -1.89
SHOX2O60902 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SHOX2O60902 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
SHOX2O60902 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHOX2O60902 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.27□□□□□ -1.89
SHOX2O60902 AL590004.2-201ENST00000404787 371 ntBASIC3.27□□□□□ -1.89
SHOX2O60902 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.27□□□□□ -1.89
SHOX2O60902 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.27□□□□□ -1.89
SHOX2O60902 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms