Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.02□□□□□ -1.77
O00370 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.02□□□□□ -1.77
O00370 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
O00370 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.02□□□□□ -1.77
O00370 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
O00370 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
O00370 AC006504.1-201ENST00000562493 3666 ntBASIC4.01□□□□□ -1.77
O00370 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
O00370 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.01□□□□□ -1.77
O00370 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
O00370 PRO1804-201ENST00000623780 2050 ntBASIC4.01□□□□□ -1.77
O00370 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.01□□□□□ -1.77
O00370 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
O00370 ASNSP1-204ENST00000641977 1664 ntBASIC4.01□□□□□ -1.77
O00370 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
O00370 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
O00370 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
O00370 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
O00370 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
O00370 SNORA51.12-201ENST00000384448 134 ntBASIC4.01□□□□□ -1.77
O00370 RNU6-906P-201ENST00000384700 70 ntBASIC4.01□□□□□ -1.77
O00370 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
O00370 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
O00370 MIR1183-201ENST00000408856 89 ntBASIC4.01□□□□□ -1.77
O00370 RN7SKP27-201ENST00000410684 333 ntBASIC4.01□□□□□ -1.77
O00370 PAICSP7-201ENST00000419829 962 ntBASIC4.01□□□□□ -1.77
O00370 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.01□□□□□ -1.77
O00370 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.01□□□□□ -1.77
O00370 RPL21P109-201ENST00000422213 475 ntBASIC4.01□□□□□ -1.77
O00370 AL591419.1-201ENST00000427423 339 ntBASIC4.01□□□□□ -1.77
O00370 MTCYBP32-201ENST00000427945 1084 ntBASIC4.01□□□□□ -1.77
O00370 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.01□□□□□ -1.77
O00370 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.01□□□□□ -1.77
O00370 MOB1AP1-201ENST00000430903 535 ntBASIC4.01□□□□□ -1.77
O00370 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.01□□□□□ -1.77
O00370 SKP1P1-201ENST00000438081 489 ntBASIC4.01□□□□□ -1.77
O00370 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.01□□□□□ -1.77
O00370 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.01□□□□□ -1.77
O00370 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.01□□□□□ -1.77
O00370 AC098824.1-201ENST00000453565 980 ntBASIC4.01□□□□□ -1.77
O00370 UBDP1-202ENST00000457888 382 ntBASIC4.01□□□□□ -1.77
O00370 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.01□□□□□ -1.77
O00370 AC092451.1-201ENST00000480211 153 ntBASIC4.01□□□□□ -1.77
O00370 RPS27P23-201ENST00000487608 251 ntBASIC4.01□□□□□ -1.77
O00370 AC108729.1-201ENST00000487812 947 ntBASIC4.01□□□□□ -1.77
O00370 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.01□□□□□ -1.77
O00370 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.01□□□□□ -1.77
O00370 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.01□□□□□ -1.77
O00370 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.01□□□□□ -1.77
O00370 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.01□□□□□ -1.77
O00370 MTCO1P30-201ENST00000515244 580 ntBASIC4.01□□□□□ -1.77
O00370 RNU6-1231P-201ENST00000517185 103 ntBASIC4.01□□□□□ -1.77
O00370 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.01□□□□□ -1.77
O00370 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
O00370 SUMO2P20-201ENST00000520803 283 ntBASIC4.01□□□□□ -1.77
O00370 AF279873.1-201ENST00000523393 313 ntBASIC4.01□□□□□ -1.77
O00370 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.01□□□□□ -1.77
O00370 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.01□□□□□ -1.77
O00370 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.01□□□□□ -1.77
O00370 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.01□□□□□ -1.77
O00370 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.01□□□□□ -1.77
O00370 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.01□□□□□ -1.77
O00370 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.01□□□□□ -1.77
O00370 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.01□□□□□ -1.77
O00370 AL020997.3-201ENST00000602843 359 ntBASIC4.01□□□□□ -1.77
O00370 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.01□□□□□ -1.77
O00370 AL451086.1-201ENST00000605596 223 ntBASIC4.01□□□□□ -1.77
O00370 AL354760.1-201ENST00000608357 643 ntBASIC4.01□□□□□ -1.77
O00370 AC009237.15-201ENST00000610252 501 ntBASIC4.01□□□□□ -1.77
O00370 AC005344.1-201ENST00000613391 459 ntBASIC4.01□□□□□ -1.77
O00370 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
O00370 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
O00370 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4□□□□□ -1.77
O00370 AP004289.2-201ENST00000444413 1457 ntBASIC4□□□□□ -1.77
O00370 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
O00370 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4□□□□□ -1.77
O00370 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
O00370 MTCO2P31-201ENST00000402702 684 ntBASIC4□□□□□ -1.77
O00370 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4□□□□□ -1.77
O00370 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4□□□□□ -1.77
O00370 CDC27P1-201ENST00000445384 715 ntBASIC4□□□□□ -1.77
O00370 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4□□□□□ -1.77
O00370 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
O00370 AC239367.2-201ENST00000447309 705 ntBASIC4□□□□□ -1.77
O00370 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4□□□□□ -1.77
O00370 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4□□□□□ -1.77
O00370 NANOGP10-201ENST00000453325 895 ntBASIC4□□□□□ -1.77
O00370 PTGES3P5-201ENST00000455109 434 ntBASIC4□□□□□ -1.77
O00370 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4□□□□□ -1.77
O00370 RN7SL132P-201ENST00000478131 296 ntBASIC4□□□□□ -1.77
O00370 NCOR1P1-202ENST00000486162 291 ntBASIC4□□□□□ -1.77
O00370 NIPA2P2-201ENST00000496376 1083 ntBASIC4□□□□□ -1.77
O00370 AC011352.3-201ENST00000505162 593 ntBASIC4□□□□□ -1.77
O00370 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4□□□□□ -1.77
O00370 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4□□□□□ -1.77
O00370 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4□□□□□ -1.77
O00370 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4□□□□□ -1.77
O00370 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4□□□□□ -1.77
O00370 DEFB130C-202ENST00000530001 230 ntBASIC4□□□□□ -1.77
O00370 AP004242.1-201ENST00000533701 349 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms