Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PKP3Q9Y446 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PKP3Q9Y446 AC067945.1-201ENST00000342609 618 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 RNU1-15P-201ENST00000353977 144 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 RNA5SP88-201ENST00000365560 109 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
PKP3Q9Y446 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PKP3Q9Y446 AC097374.1-203ENST00000400783 485 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 SNORA11B-201ENST00000408175 129 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.33□□□□□ -1.72
PKP3Q9Y446 AC069218.2-201ENST00000411665 344 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.33□□□□□ -1.72
PKP3Q9Y446 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 AL139095.3-201ENST00000419672 1203 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 UBE2FP3-201ENST00000436366 524 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 AC092473.1-201ENST00000441098 221 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.33□□□□□ -1.72
PKP3Q9Y446 AL512326.1-201ENST00000443050 721 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.33□□□□□ -1.72
PKP3Q9Y446 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.33□□□□□ -1.72
PKP3Q9Y446 IFNWP4-201ENST00000453148 294 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 ARPC3P2-201ENST00000457786 533 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 TPTE2P5-203ENST00000458118 728 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 RPL7P22-201ENST00000466005 733 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.33□□□□□ -1.72
PKP3Q9Y446 AC093840.1-201ENST00000511599 336 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.33□□□□□ -1.72
PKP3Q9Y446 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.33□□□□□ -1.72
PKP3Q9Y446 AC008802.1-201ENST00000519121 791 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.33□□□□□ -1.72
PKP3Q9Y446 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.33□□□□□ -1.72
PKP3Q9Y446 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.33□□□□□ -1.72
PKP3Q9Y446 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.33□□□□□ -1.72
PKP3Q9Y446 AC068790.4-201ENST00000602474 263 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 MTCYBP22-201ENST00000603788 447 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 BNIP3P11-201ENST00000603878 563 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 RNU6-88P-201ENST00000606801 100 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 AL158063.1-201ENST00000615349 536 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 MIR7844-201ENST00000616161 122 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 SNX18P1Y-201ENST00000616231 511 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.33□□□□□ -1.72
PKP3Q9Y446 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.33□□□□□ -1.72
PKP3Q9Y446 AC019278.1-201ENST00000623516 479 ntBASIC4.33□□□□□ -1.72
PKP3Q9Y446 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
PKP3Q9Y446 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.33□□□□□ -1.72
PKP3Q9Y446 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PKP3Q9Y446 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PKP3Q9Y446 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PKP3Q9Y446 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PKP3Q9Y446 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PKP3Q9Y446 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PKP3Q9Y446 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PKP3Q9Y446 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 AL672167.1-206ENST00000356293 943 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 RNU6-660P-201ENST00000364566 109 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 RN7SKP216-201ENST00000411050 312 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 TPMTP3-201ENST00000411928 735 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 RPL7P8-201ENST00000411964 730 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 AC011933.1-201ENST00000413334 321 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 COX6CP15-201ENST00000426313 211 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 RPS29P17-201ENST00000430795 166 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 RPL23AP52-201ENST00000439311 478 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 ZNF114P1-201ENST00000453500 292 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 TRBV26-201ENST00000456572 344 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 AC116533.1-201ENST00000459748 321 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 AC097493.1-201ENST00000463958 372 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 MTCYBP37-201ENST00000510642 1133 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 RNA5SP216-201ENST00000516111 123 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 IGLV3-26-201ENST00000520756 302 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 HIGD1AP10-201ENST00000527837 282 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 AC009643.1-201ENST00000532030 391 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 AC024909.2-201ENST00000553035 286 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 AC124068.1-201ENST00000563131 678 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 MIR4277-201ENST00000578298 84 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 MIR4512-201ENST00000583257 77 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 KPNA2P3-201ENST00000584190 848 ntBASIC4.32□□□□□ -1.72
PKP3Q9Y446 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.32□□□□□ -1.72
PKP3Q9Y446 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms