Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SEC61A2Q9H9S3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.76□□□□□ -1.65
SEC61A2Q9H9S3 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SEC61A2Q9H9S3 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
SEC61A2Q9H9S3 MTND5P3-201ENST00000438536 1800 ntBASIC4.76□□□□□ -1.65
SEC61A2Q9H9S3 SMG1P4-204ENST00000523028 4131 ntBASIC4.76□□□□□ -1.65
SEC61A2Q9H9S3 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SEC61A2Q9H9S3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.76□□□□□ -1.65
SEC61A2Q9H9S3 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AC090229.1-201ENST00000590983 1609 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 RLIMP2-201ENST00000427891 1563 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 RNA5SP335-201ENST00000363817 110 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 OR1L6-202ENST00000373684 1044 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 RNU6-171P-201ENST00000384354 107 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 RNA5SP241-201ENST00000391326 114 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 RPL32P23-201ENST00000397237 405 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 HMGB1P17-201ENST00000403495 628 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AL133388.1-201ENST00000404509 287 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AL354719.1-201ENST00000406535 843 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 OR4K12P-201ENST00000406538 961 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 TPMTP2-201ENST00000414372 726 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 RPL7AP49-201ENST00000429522 581 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AL591438.1-201ENST00000433508 581 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 RPS15AP9-201ENST00000439856 381 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 FAM103A2P-201ENST00000444122 354 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AC002381.1-201ENST00000447049 280 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AP000797.2-201ENST00000475768 606 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 RPS4XP18-201ENST00000495480 763 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 RNU6-714P-201ENST00000516963 103 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AC104986.1-201ENST00000517978 436 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 BTF3P12-201ENST00000519620 469 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AC023050.3-201ENST00000541142 333 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 SULT1C2P1-202ENST00000562418 459 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 RN7SL290P-201ENST00000578661 300 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 MIR3167-201ENST00000579623 85 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 RN7SL356P-201ENST00000582228 248 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 MIR3936-201ENST00000584304 110 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AC115085.1-201ENST00000588924 229 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 OR10AB1P-201ENST00000609613 938 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AL603758.1-201ENST00000618654 241 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 AC116158.1-201ENST00000560231 2129 ntBASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.75□□□□□ -1.65
SEC61A2Q9H9S3 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 MTCO1P9-201ENST00000505577 1534 ntBASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 NACAP2-201ENST00000318548 624 ntBASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 RNU6-444P-201ENST00000383988 108 ntBASIC4.74□□□□□ -1.65
SEC61A2Q9H9S3 Y_RNA.431-201ENST00000384086 102 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms