Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 RNU1-61P-201ENST00000516107 151 ntBASIC2.81□□□□□ -1.96
CCDC58Q4VC31 RNU6-826P-201ENST00000516827 104 ntBASIC2.81□□□□□ -1.96
CCDC58Q4VC31 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 AC092868.3-201ENST00000560515 784 ntBASIC2.81□□□□□ -1.96
CCDC58Q4VC31 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 AC068831.7-201ENST00000616954 363 ntBASIC2.81□□□□□ -1.96
CCDC58Q4VC31 AC090897.3-201ENST00000636973 1157 ntBASIC2.81□□□□□ -1.96
CCDC58Q4VC31 AC009093.8-201ENST00000641769 292 ntBASIC2.81□□□□□ -1.96
CCDC58Q4VC31 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 MTCO1P8-201ENST00000416914 1523 ntBASIC2.81□□□□□ -1.96
CCDC58Q4VC31 AL353743.4-201ENST00000422653 1547 ntBASIC2.81□□□□□ -1.96
CCDC58Q4VC31 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
CCDC58Q4VC31 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC58Q4VC31 AC009487.2-201ENST00000420969 6821 ntBASIC2.8□□□□□ -1.96
CCDC58Q4VC31 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.8□□□□□ -1.96
CCDC58Q4VC31 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
CCDC58Q4VC31 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CCDC58Q4VC31 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC58Q4VC31 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CCDC58Q4VC31 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC58Q4VC31 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
CCDC58Q4VC31 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC58Q4VC31 AL096701.2-201ENST00000416920 238 ntBASIC2.8□□□□□ -1.96
CCDC58Q4VC31 AC023128.2-201ENST00000420880 1223 ntBASIC2.8□□□□□ -1.96
CCDC58Q4VC31 AC244098.2-201ENST00000422068 99 ntBASIC2.8□□□□□ -1.96
CCDC58Q4VC31 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC58Q4VC31 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.8□□□□□ -1.96
CCDC58Q4VC31 AC005189.1-201ENST00000431286 310 ntBASIC2.8□□□□□ -1.96
CCDC58Q4VC31 AC073063.1-201ENST00000434352 607 ntBASIC2.8□□□□□ -1.96
CCDC58Q4VC31 RPL23AP33-201ENST00000442301 452 ntBASIC2.8□□□□□ -1.96
CCDC58Q4VC31 Z96811.1-201ENST00000445880 108 ntBASIC2.8□□□□□ -1.96
CCDC58Q4VC31 AC008571.1-201ENST00000467232 300 ntBASIC2.8□□□□□ -1.96
CCDC58Q4VC31 RPS27AP9-201ENST00000477681 438 ntBASIC2.8□□□□□ -1.96
CCDC58Q4VC31 AP004217.1-201ENST00000480579 346 ntBASIC2.8□□□□□ -1.96
CCDC58Q4VC31 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC58Q4VC31 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.8□□□□□ -1.96
CCDC58Q4VC31 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC58Q4VC31 RNU1-95P-201ENST00000516357 160 ntBASIC2.8□□□□□ -1.96
CCDC58Q4VC31 RNU1-128P-201ENST00000516704 160 ntBASIC2.8□□□□□ -1.96
CCDC58Q4VC31 MTCYBP41-201ENST00000528913 1123 ntBASIC2.8□□□□□ -1.96
CCDC58Q4VC31 HIGD1AP1-201ENST00000550979 275 ntBASIC2.8□□□□□ -1.96
CCDC58Q4VC31 AC138761.3-201ENST00000579993 334 ntBASIC2.8□□□□□ -1.96
CCDC58Q4VC31 AL391834.1-201ENST00000609609 560 ntBASIC2.8□□□□□ -1.96
CCDC58Q4VC31 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC2.8□□□□□ -1.96
CCDC58Q4VC31 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC2.8□□□□□ -1.96
CCDC58Q4VC31 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
CCDC58Q4VC31 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.8□□□□□ -1.96
CCDC58Q4VC31 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
CCDC58Q4VC31 Z83843.1-201ENST00000604070 3685 ntBASIC2.79□□□□□ -1.96
CCDC58Q4VC31 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC58Q4VC31 RPL23AP57-201ENST00000332361 466 ntBASIC2.79□□□□□ -1.96
CCDC58Q4VC31 ESD-201ENST00000378697 1079 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC58Q4VC31 SNORA56-201ENST00000383966 129 ntBASIC2.79□□□□□ -1.96
CCDC58Q4VC31 AL139095.1-201ENST00000404326 391 ntBASIC2.79□□□□□ -1.96
CCDC58Q4VC31 AL138880.1-201ENST00000405824 642 ntBASIC2.79□□□□□ -1.96
CCDC58Q4VC31 RNA5SP274-201ENST00000410484 108 ntBASIC2.79□□□□□ -1.96
CCDC58Q4VC31 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC58Q4VC31 C4BPAP2-201ENST00000428434 478 ntBASIC2.79□□□□□ -1.96
CCDC58Q4VC31 MUPP-201ENST00000438111 566 ntBASIC2.79□□□□□ -1.96
CCDC58Q4VC31 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC58Q4VC31 RPL21P23-201ENST00000446654 460 ntBASIC2.79□□□□□ -1.96
CCDC58Q4VC31 RPL5P24-201ENST00000463742 885 ntBASIC2.79□□□□□ -1.96
CCDC58Q4VC31 AC020898.1-201ENST00000474167 787 ntBASIC2.79□□□□□ -1.96
CCDC58Q4VC31 RPL9P33-201ENST00000484311 566 ntBASIC2.79□□□□□ -1.96
CCDC58Q4VC31 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC58Q4VC31 AC104619.4-201ENST00000510773 249 ntBASIC2.79□□□□□ -1.96
CCDC58Q4VC31 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC58Q4VC31 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC58Q4VC31 AC125611.2-201ENST00000551907 647 ntBASIC2.79□□□□□ -1.96
CCDC58Q4VC31 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC58Q4VC31 MIR4276-201ENST00000584832 70 ntBASIC2.79□□□□□ -1.96
CCDC58Q4VC31 MIR4443-201ENST00000585052 53 ntBASIC2.79□□□□□ -1.96
CCDC58Q4VC31 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC2.79□□□□□ -1.96
CCDC58Q4VC31 AC067959.1-201ENST00000604334 379 ntBASIC2.79□□□□□ -1.96
CCDC58Q4VC31 uc_338.25-201ENST00000613756 156 ntBASIC2.79□□□□□ -1.96
CCDC58Q4VC31 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.79□□□□□ -1.96
CCDC58Q4VC31 AC006249.1-201ENST00000621223 471 ntBASIC2.79□□□□□ -1.96
CCDC58Q4VC31 AC243312.2-201ENST00000623340 601 ntBASIC2.79□□□□□ -1.96
CCDC58Q4VC31 AC244258.1-201ENST00000637553 1071 ntBASIC2.79□□□□□ -1.96
CCDC58Q4VC31 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC58Q4VC31 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
CCDC58Q4VC31 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.79□□□□□ -1.96
CCDC58Q4VC31 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC58Q4VC31 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.78□□□□□ -1.96
CCDC58Q4VC31 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CCDC58Q4VC31 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
CCDC58Q4VC31 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC2.78□□□□□ -1.96
CCDC58Q4VC31 CD24P4-201ENST00000382840 243 ntBASIC2.78□□□□□ -1.96
CCDC58Q4VC31 SEPT7P2-202ENST00000398921 823 ntBASIC2.78□□□□□ -1.96
CCDC58Q4VC31 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
CCDC58Q4VC31 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms