Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH11P55287 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.81□□□□□ -1.8
CDH11P55287 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.81□□□□□ -1.8
CDH11P55287 RFPL1S-203ENST00000539579 330 ntBASIC3.81□□□□□ -1.8
CDH11P55287 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH11P55287 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.81□□□□□ -1.8
CDH11P55287 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.81□□□□□ -1.8
CDH11P55287 AC079171.1-201ENST00000568788 914 ntBASIC3.81□□□□□ -1.8
CDH11P55287 AC008088.1-201ENST00000580993 280 ntBASIC3.81□□□□□ -1.8
CDH11P55287 MIR4512-201ENST00000583257 77 ntBASIC3.81□□□□□ -1.8
CDH11P55287 SNORD39.3-201ENST00000584451 71 ntBASIC3.81□□□□□ -1.8
CDH11P55287 MIR3138-201ENST00000585238 82 ntBASIC3.81□□□□□ -1.8
CDH11P55287 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH11P55287 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.81□□□□□ -1.8
CDH11P55287 AC069304.2-201ENST00000605154 435 ntBASIC3.81□□□□□ -1.8
CDH11P55287 AC097065.2-201ENST00000608159 533 ntBASIC3.81□□□□□ -1.8
CDH11P55287 uc_338.13-201ENST00000618243 179 ntBASIC3.81□□□□□ -1.8
CDH11P55287 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH11P55287 AC068724.3-201ENST00000625906 87 ntBASIC3.81□□□□□ -1.8
CDH11P55287 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.81□□□□□ -1.8
CDH11P55287 AC103706.2-201ENST00000638080 240 ntBASIC3.81□□□□□ -1.8
CDH11P55287 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH11P55287 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDH11P55287 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CDH11P55287 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CDH11P55287 SGO1P2-201ENST00000429458 1589 ntBASIC3.8□□□□□ -1.8
CDH11P55287 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CDH11P55287 SAGE2P-201ENST00000420011 2126 ntBASIC3.8□□□□□ -1.8
CDH11P55287 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDH11P55287 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH11P55287 AL391994.1-201ENST00000254724 282 ntBASIC3.8□□□□□ -1.8
CDH11P55287 OR4A15-201ENST00000314706 1035 ntBASIC3.8□□□□□ -1.8
CDH11P55287 MIR383-201ENST00000362257 73 ntBASIC3.8□□□□□ -1.8
CDH11P55287 RNU6-216P-201ENST00000363282 104 ntBASIC3.8□□□□□ -1.8
CDH11P55287 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.8□□□□□ -1.8
CDH11P55287 MIR506-201ENST00000384998 124 ntBASIC3.8□□□□□ -1.8
CDH11P55287 RPS26P8-201ENST00000393490 348 ntBASIC3.8□□□□□ -1.8
CDH11P55287 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDH11P55287 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH11P55287 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH11P55287 RPS3AP9-201ENST00000417027 792 ntBASIC3.8□□□□□ -1.8
CDH11P55287 AL139095.3-201ENST00000419672 1203 ntBASIC3.8□□□□□ -1.8
CDH11P55287 PTP4A1P5-201ENST00000420305 455 ntBASIC3.8□□□□□ -1.8
CDH11P55287 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.8□□□□□ -1.8
CDH11P55287 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH11P55287 MTCO3P1-205ENST00000422088 832 ntBASIC3.8□□□□□ -1.8
CDH11P55287 AC011233.1-201ENST00000422812 283 ntBASIC3.8□□□□□ -1.8
CDH11P55287 RPL23AP38-201ENST00000423801 469 ntBASIC3.8□□□□□ -1.8
CDH11P55287 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH11P55287 MTCYBP3-201ENST00000445588 1137 ntBASIC3.8□□□□□ -1.8
CDH11P55287 AL133217.1-201ENST00000450980 425 ntBASIC3.8□□□□□ -1.8
CDH11P55287 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH11P55287 NUTF2P7-201ENST00000453086 375 ntBASIC3.8□□□□□ -1.8
CDH11P55287 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH11P55287 snoU13.7-201ENST00000459220 104 ntBASIC3.8□□□□□ -1.8
CDH11P55287 AL672167.3-201ENST00000465951 960 ntBASIC3.8□□□□□ -1.8
CDH11P55287 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH11P55287 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH11P55287 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH11P55287 AC092851.1-201ENST00000535964 478 ntBASIC3.8□□□□□ -1.8
CDH11P55287 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH11P55287 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH11P55287 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.8□□□□□ -1.8
CDH11P55287 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.8□□□□□ -1.8
CDH11P55287 AC074029.1-201ENST00000552531 1044 ntBASIC3.8□□□□□ -1.8
CDH11P55287 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.8□□□□□ -1.8
CDH11P55287 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH11P55287 AC074051.3-201ENST00000570238 358 ntBASIC3.8□□□□□ -1.8
CDH11P55287 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.8□□□□□ -1.8
CDH11P55287 MIR4999-201ENST00000585029 91 ntBASIC3.8□□□□□ -1.8
CDH11P55287 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.8□□□□□ -1.8
CDH11P55287 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CDH11P55287 VN1R82P-201ENST00000601481 356 ntBASIC3.8□□□□□ -1.8
CDH11P55287 AC103881.1-201ENST00000603476 538 ntBASIC3.8□□□□□ -1.8
CDH11P55287 AL354984.3-201ENST00000604803 325 ntBASIC3.8□□□□□ -1.8
CDH11P55287 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.8□□□□□ -1.8
CDH11P55287 AC068831.8-201ENST00000620171 435 ntBASIC3.8□□□□□ -1.8
CDH11P55287 AP000676.3-201ENST00000623299 569 ntBASIC3.8□□□□□ -1.8
CDH11P55287 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.8□□□□□ -1.8
CDH11P55287 EIF2AP4-201ENST00000424793 1781 ntBASIC3.8□□□□□ -1.8
CDH11P55287 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CDH11P55287 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH11P55287 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH11P55287 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
CDH11P55287 AC022893.2-201ENST00000564832 3296 ntBASIC3.8□□□□□ -1.8
CDH11P55287 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
CDH11P55287 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH11P55287 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.79□□□□□ -1.8
CDH11P55287 MIR331-201ENST00000362302 94 ntBASIC3.79□□□□□ -1.8
CDH11P55287 RNU6-931P-201ENST00000363850 107 ntBASIC3.79□□□□□ -1.8
CDH11P55287 RNA5SP479-201ENST00000364858 117 ntBASIC3.79□□□□□ -1.8
CDH11P55287 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.79□□□□□ -1.8
CDH11P55287 RNU6-441P-201ENST00000384545 106 ntBASIC3.79□□□□□ -1.8
CDH11P55287 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CDH11P55287 RPL17P36-201ENST00000420302 549 ntBASIC3.79□□□□□ -1.8
CDH11P55287 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH11P55287 SDCBPP2-201ENST00000424643 885 ntBASIC3.79□□□□□ -1.8
CDH11P55287 AL593851.1-201ENST00000426171 157 ntBASIC3.79□□□□□ -1.8
CDH11P55287 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.79□□□□□ -1.8
CDH11P55287 UBE2V1P1-201ENST00000430836 445 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms