Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 NPM1P11-201ENST00000417106 855 ntBASIC4.21□□□□□ -1.74
LDB2O43679 MTCO3P1-205ENST00000422088 832 ntBASIC4.21□□□□□ -1.74
LDB2O43679 AC233981.1-201ENST00000423224 461 ntBASIC4.21□□□□□ -1.74
LDB2O43679 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.21□□□□□ -1.74
LDB2O43679 AC004975.1-201ENST00000428733 208 ntBASIC4.21□□□□□ -1.74
LDB2O43679 AL589823.1-201ENST00000429577 183 ntBASIC4.21□□□□□ -1.74
LDB2O43679 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.21□□□□□ -1.74
LDB2O43679 AC241584.1-201ENST00000438469 1241 ntBASIC4.21□□□□□ -1.74
LDB2O43679 AL357520.1-201ENST00000441557 453 ntBASIC4.21□□□□□ -1.74
LDB2O43679 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.21□□□□□ -1.74
LDB2O43679 TAF9P1-201ENST00000445421 515 ntBASIC4.21□□□□□ -1.74
LDB2O43679 NUTF2P3-201ENST00000448540 384 ntBASIC4.21□□□□□ -1.74
LDB2O43679 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LDB2O43679 NDUFA5P7-201ENST00000452914 242 ntBASIC4.21□□□□□ -1.74
LDB2O43679 TAF9P2-201ENST00000454958 515 ntBASIC4.21□□□□□ -1.74
LDB2O43679 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.21□□□□□ -1.74
LDB2O43679 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.21□□□□□ -1.74
LDB2O43679 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.21□□□□□ -1.74
LDB2O43679 MTATP6P22-201ENST00000507369 598 ntBASIC4.21□□□□□ -1.74
LDB2O43679 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.21□□□□□ -1.74
LDB2O43679 KCTD9P2-201ENST00000512203 1013 ntBASIC4.21□□□□□ -1.74
LDB2O43679 SNORA48.10-201ENST00000516965 160 ntBASIC4.21□□□□□ -1.74
LDB2O43679 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.21□□□□□ -1.74
LDB2O43679 RPL12P22-201ENST00000519073 490 ntBASIC4.21□□□□□ -1.74
LDB2O43679 AC134698.5-201ENST00000519444 336 ntBASIC4.21□□□□□ -1.74
LDB2O43679 IFITM8P-201ENST00000522529 394 ntBASIC4.21□□□□□ -1.74
LDB2O43679 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.21□□□□□ -1.74
LDB2O43679 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.21□□□□□ -1.74
LDB2O43679 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.21□□□□□ -1.74
LDB2O43679 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.21□□□□□ -1.74
LDB2O43679 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.21□□□□□ -1.74
LDB2O43679 AC012435.1-202ENST00000568772 240 ntBASIC4.21□□□□□ -1.74
LDB2O43679 AC011260.1-201ENST00000578420 472 ntBASIC4.21□□□□□ -1.74
LDB2O43679 AC017100.2-201ENST00000584628 355 ntBASIC4.21□□□□□ -1.74
LDB2O43679 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.21□□□□□ -1.74
LDB2O43679 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.21□□□□□ -1.74
LDB2O43679 VN1R92P-201ENST00000598511 928 ntBASIC4.21□□□□□ -1.74
LDB2O43679 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LDB2O43679 AC020910.2-201ENST00000603635 610 ntBASIC4.21□□□□□ -1.74
LDB2O43679 AC023043.4-201ENST00000612081 449 ntBASIC4.21□□□□□ -1.74
LDB2O43679 AC090116.1-201ENST00000615679 446 ntBASIC4.21□□□□□ -1.74
LDB2O43679 AL031667.3-201ENST00000620124 655 ntBASIC4.21□□□□□ -1.74
LDB2O43679 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.21□□□□□ -1.74
LDB2O43679 AC008785.1-201ENST00000624475 456 ntBASIC4.21□□□□□ -1.74
LDB2O43679 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.21□□□□□ -1.74
LDB2O43679 AC127502.3-201ENST00000636170 1206 ntBASIC4.21□□□□□ -1.74
LDB2O43679 ZNF833P-201ENST00000424938 1494 ntBASIC4.21□□□□□ -1.74
LDB2O43679 AC091046.3-201ENST00000631455 1574 ntBASIC4.21□□□□□ -1.74
LDB2O43679 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LDB2O43679 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
LDB2O43679 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LDB2O43679 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.2□□□□□ -1.74
LDB2O43679 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.2□□□□□ -1.74
LDB2O43679 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.2□□□□□ -1.74
LDB2O43679 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.2□□□□□ -1.74
LDB2O43679 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LDB2O43679 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LDB2O43679 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LDB2O43679 RNA5SP52-201ENST00000362448 134 ntBASIC4.2□□□□□ -1.74
LDB2O43679 Y_RNA.25-201ENST00000362528 102 ntBASIC4.2□□□□□ -1.74
LDB2O43679 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
LDB2O43679 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.2□□□□□ -1.74
LDB2O43679 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LDB2O43679 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LDB2O43679 ATP5F1P4-201ENST00000397288 746 ntBASIC4.2□□□□□ -1.74
LDB2O43679 MIR1284-201ENST00000408337 120 ntBASIC4.2□□□□□ -1.74
LDB2O43679 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.2□□□□□ -1.74
LDB2O43679 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.2□□□□□ -1.74
LDB2O43679 AC009237.2-201ENST00000421358 284 ntBASIC4.2□□□□□ -1.74
LDB2O43679 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.2□□□□□ -1.74
LDB2O43679 RPL23AP15-201ENST00000450202 459 ntBASIC4.2□□□□□ -1.74
LDB2O43679 RPL23AP35-201ENST00000451906 501 ntBASIC4.2□□□□□ -1.74
LDB2O43679 RPS15AP1-201ENST00000457423 391 ntBASIC4.2□□□□□ -1.74
LDB2O43679 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.2□□□□□ -1.74
LDB2O43679 AC091167.1-201ENST00000492017 396 ntBASIC4.2□□□□□ -1.74
LDB2O43679 AC113430.1-201ENST00000506872 718 ntBASIC4.2□□□□□ -1.74
LDB2O43679 PARP4P3-201ENST00000510265 317 ntBASIC4.2□□□□□ -1.74
LDB2O43679 RNU6-488P-201ENST00000515918 99 ntBASIC4.2□□□□□ -1.74
LDB2O43679 RNU6-202P-201ENST00000515998 96 ntBASIC4.2□□□□□ -1.74
LDB2O43679 AF186190.1-201ENST00000517470 480 ntBASIC4.2□□□□□ -1.74
LDB2O43679 AC106038.2-201ENST00000520706 568 ntBASIC4.2□□□□□ -1.74
LDB2O43679 AP003033.1-201ENST00000527244 415 ntBASIC4.2□□□□□ -1.74
LDB2O43679 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.2□□□□□ -1.74
LDB2O43679 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
LDB2O43679 PDCD5P1-201ENST00000543528 309 ntBASIC4.2□□□□□ -1.74
LDB2O43679 AC063950.1-201ENST00000552036 308 ntBASIC4.2□□□□□ -1.74
LDB2O43679 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.2□□□□□ -1.74
LDB2O43679 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.2□□□□□ -1.74
LDB2O43679 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.2□□□□□ -1.74
LDB2O43679 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.2□□□□□ -1.74
LDB2O43679 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.2□□□□□ -1.74
LDB2O43679 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.2□□□□□ -1.74
LDB2O43679 AC010200.2-201ENST00000605098 235 ntBASIC4.2□□□□□ -1.74
LDB2O43679 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LDB2O43679 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.2□□□□□ -1.74
LDB2O43679 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.2□□□□□ -1.74
LDB2O43679 MIR7702-201ENST00000621931 59 ntBASIC4.2□□□□□ -1.74
LDB2O43679 AC120349.2-201ENST00000625002 298 ntBASIC4.2□□□□□ -1.74
LDB2O43679 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LDB2O43679 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms