Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 RNA5SP477-201ENST00000362639 119 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 SNORD114-19-201ENST00000363072 75 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 RNU6-263P-201ENST00000363811 107 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 RNU6-353P-201ENST00000364266 108 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 RNU4-11P-201ENST00000365287 132 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AL672167.2-201ENST00000377164 879 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 SNORD116-11-201ENST00000383882 92 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 SNORD116-21-201ENST00000384507 92 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 TRAV35-201ENST00000390462 330 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 RNU6-1300P-201ENST00000391046 108 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 SNORA40.5-201ENST00000391061 128 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC005522.1-201ENST00000395416 346 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 BTBD10P2-201ENST00000404779 676 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 SNORA81-201ENST00000408493 178 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 TRGV7-201ENST00000427089 353 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC091390.2-201ENST00000432573 374 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 RPL12P11-201ENST00000439970 501 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AL353748.1-201ENST00000440753 474 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC009296.1-201ENST00000443146 155 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 RPS27P5-201ENST00000444247 244 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC002486.2-201ENST00000447806 590 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 CEACAMP6-201ENST00000452007 574 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 HSPE1P25-201ENST00000455484 251 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 RPL9P32-201ENST00000464118 620 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 GMFBP1-201ENST00000467831 427 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC098847.1-201ENST00000473094 348 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC007998.1-201ENST00000474156 672 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 HMGN2P25-201ENST00000486956 268 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC005840.1-201ENST00000498412 377 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 SNORA58-201ENST00000505219 137 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 OR51K1P-201ENST00000510214 950 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 SNORD33.1-201ENST00000516213 88 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 RNA5SP438-201ENST00000516561 112 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 IGLV3-6-201ENST00000523937 250 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 KCTD9P4-201ENST00000526766 1166 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 NACAP3-201ENST00000552100 481 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC063949.1-201ENST00000552900 865 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 HSPE1P2-201ENST00000554777 306 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC018552.3-201ENST00000567416 561 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC002310.3-201ENST00000569728 723 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 VN1R85P-201ENST00000601587 426 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AL359999.1-201ENST00000604513 294 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AL513218.1-201ENST00000606527 391 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC037487.3-201ENST00000606668 112 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC005021.1-201ENST00000608730 355 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC099676.1-201ENST00000608886 657 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AP002799.1-201ENST00000623552 423 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 U6.95-201ENST00000636931 70 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AC087821.2-201ENST00000637086 450 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 AL445487.1-201ENST00000415694 1580 ntBASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
KRTAP4-3Q9BYR4 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms