Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 RN7SKP33-201ENST00000410942 340 ntBASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 RPS20P14-201ENST00000412545 360 ntBASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 RPS27AP14-201ENST00000422868 454 ntBASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 AL049745.1-201ENST00000433953 286 ntBASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 AL591623.2-201ENST00000449978 222 ntBASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 MEMO1P3-201ENST00000459811 302 ntBASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 AC079804.1-201ENST00000461922 436 ntBASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 RPS27AP17-201ENST00000463344 455 ntBASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 AC091564.1-201ENST00000464563 479 ntBASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 RPL9P33-201ENST00000484311 566 ntBASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 AC109464.2-201ENST00000510242 943 ntBASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 NPM1P6-201ENST00000521088 871 ntBASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 OR5G4P-201ENST00000525251 760 ntBASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 RPL23AP97-201ENST00000568955 471 ntBASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 AL121834.1-201ENST00000572284 509 ntBASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 AC141257.3-201ENST00000572906 215 ntBASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 MIR4801-201ENST00000582704 82 ntBASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 AC005771.1-201ENST00000585581 349 ntBASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 AL160394.1-201ENST00000624765 724 ntBASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 AL118496.1-201ENST00000440201 1812 ntBASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
ATG4AQ8WYN0 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 RNU6-348P-201ENST00000384386 107 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 DSTNP4-201ENST00000399472 474 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AC025750.1-201ENST00000399891 379 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 RPS24P12-201ENST00000402084 394 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AL645733.1-201ENST00000402250 217 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 MTCYBP36-201ENST00000404146 440 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 RN7SKP106-201ENST00000410832 272 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 SNORA74C-2-201ENST00000411179 201 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AC109780.2-201ENST00000413467 845 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 SNRPFP1-201ENST00000414761 252 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 RPL6P29-201ENST00000414863 865 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 VN1R10P-201ENST00000447106 875 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AC239367.2-201ENST00000447309 705 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 RPL10P17-201ENST00000453852 316 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 RPS26P28-201ENST00000470806 348 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AC010301.1-201ENST00000473936 355 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 RPL7AP10-201ENST00000481016 791 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 RPL32P9-201ENST00000487963 407 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AC011005.3-201ENST00000491624 395 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 PRELID3BP7-201ENST00000503606 469 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AC114981.1-201ENST00000503897 678 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AC109927.2-201ENST00000506416 303 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 RPL37P25-201ENST00000507308 276 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 PPBPP1-201ENST00000510807 373 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AC026412.2-201ENST00000512270 1075 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 RNU6-150P-201ENST00000516237 95 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 SDAD1P1-202ENST00000524156 2051 ntBASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
ATG4AQ8WYN0 AC068587.4-201ENST00000533893 186 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms