Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 RPL7AP25-201ENST00000423357 805 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 USP9YP9-201ENST00000429406 715 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 USP9YP35-201ENST00000435696 412 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 RPS24P1-201ENST00000438550 371 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 TRIM60P18-201ENST00000441518 828 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 RPL35AP28-201ENST00000459730 331 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AC079804.1-201ENST00000461922 436 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 RN7SL354P-201ENST00000469282 294 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AC107401.1-201ENST00000503426 685 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 RPL7L1P13-201ENST00000511702 739 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AC015795.1-201ENST00000513669 327 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 MTCO1P30-201ENST00000515244 580 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AP000827.1-201ENST00000527814 258 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 OR5D15P-201ENST00000531671 942 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AL512347.1-201ENST00000566420 503 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AC012414.6-201ENST00000568241 401 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AC110743.1-201ENST00000584870 478 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AC092354.1-201ENST00000606057 376 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AL031666.3-201ENST00000609320 1006 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AC005332.10-201ENST00000612725 619 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 DBF4P1-201ENST00000412976 1892 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 FAM35DP-201ENST00000323387 2712 ntBASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CLIP4Q8N3C7 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 CDR1-202ENST00000625883 1485 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 RNU1-130P-201ENST00000363930 160 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 GLULP6-201ENST00000399502 913 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 MIR1284-201ENST00000408337 120 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 MIR1911-201ENST00000410783 80 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 UQCRBP1-201ENST00000421129 336 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 RAB11AP1-201ENST00000442978 646 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AC239809.1-201ENST00000450470 217 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AC116337.2-201ENST00000477662 156 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AC090071.1-201ENST00000507713 644 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 CBX3P3-201ENST00000508108 532 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 RNY4P37-201ENST00000516225 96 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 MIR2114-201ENST00000516645 80 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 RNU6-1261P-201ENST00000517194 104 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AP002963.1-201ENST00000530590 184 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AC010546.1-201ENST00000569391 485 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AC069061.3-201ENST00000582254 823 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 MIR4443-201ENST00000585052 53 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AC008507.1-201ENST00000587506 734 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AC107304.1-201ENST00000604229 296 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AC091488.1-201ENST00000604239 660 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AC024940.4-201ENST00000605507 246 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AL021997.1-201ENST00000605757 193 ntBASIC4.05□□□□□ -1.76
CLIP4Q8N3C7 AC092354.2-201ENST00000607786 514 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms