Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.52□□□□□ -1.85
TPM4P67936 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TPM4P67936 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.52□□□□□ -1.85
TPM4P67936 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.52□□□□□ -1.85
TPM4P67936 AC243312.2-201ENST00000623340 601 ntBASIC3.52□□□□□ -1.85
TPM4P67936 MTCO1P8-201ENST00000416914 1523 ntBASIC3.52□□□□□ -1.85
TPM4P67936 Z83843.1-201ENST00000604070 3685 ntBASIC3.52□□□□□ -1.85
TPM4P67936 MTND4P31-201ENST00000425607 1343 ntBASIC3.51□□□□□ -1.85
TPM4P67936 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TPM4P67936 OR1S2-201ENST00000302592 978 ntBASIC3.51□□□□□ -1.85
TPM4P67936 RPL23AP57-201ENST00000332361 466 ntBASIC3.51□□□□□ -1.85
TPM4P67936 RNU6-386P-201ENST00000362650 107 ntBASIC3.51□□□□□ -1.85
TPM4P67936 SNORA56-201ENST00000383966 129 ntBASIC3.51□□□□□ -1.85
TPM4P67936 MIR218-2-201ENST00000385006 110 ntBASIC3.51□□□□□ -1.85
TPM4P67936 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
TPM4P67936 MIR887-201ENST00000401258 79 ntBASIC3.51□□□□□ -1.85
TPM4P67936 NUP35P2-201ENST00000416748 943 ntBASIC3.51□□□□□ -1.85
TPM4P67936 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.51□□□□□ -1.85
TPM4P67936 RPS15AP40-201ENST00000419621 391 ntBASIC3.51□□□□□ -1.85
TPM4P67936 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.51□□□□□ -1.85
TPM4P67936 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.51□□□□□ -1.85
TPM4P67936 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.51□□□□□ -1.85
TPM4P67936 RPL21P23-201ENST00000446654 460 ntBASIC3.51□□□□□ -1.85
TPM4P67936 BX276092.4-201ENST00000452056 248 ntBASIC3.51□□□□□ -1.85
TPM4P67936 PRDX3P4-201ENST00000470828 747 ntBASIC3.51□□□□□ -1.85
TPM4P67936 AC106707.2-201ENST00000484182 374 ntBASIC3.51□□□□□ -1.85
TPM4P67936 AC021087.2-201ENST00000504656 1203 ntBASIC3.51□□□□□ -1.85
TPM4P67936 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.51□□□□□ -1.85
TPM4P67936 RNU1-95P-201ENST00000516357 160 ntBASIC3.51□□□□□ -1.85
TPM4P67936 RNU1-128P-201ENST00000516704 160 ntBASIC3.51□□□□□ -1.85
TPM4P67936 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.51□□□□□ -1.85
TPM4P67936 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TPM4P67936 AC135803.1-201ENST00000608748 565 ntBASIC3.51□□□□□ -1.85
TPM4P67936 AC083809.1-201ENST00000615051 472 ntBASIC3.51□□□□□ -1.85
TPM4P67936 AC009093.8-201ENST00000641769 292 ntBASIC3.51□□□□□ -1.85
TPM4P67936 AC022031.1-201ENST00000585985 2593 ntBASIC3.51□□□□□ -1.85
TPM4P67936 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.5□□□□□ -1.85
TPM4P67936 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
TPM4P67936 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TPM4P67936 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.5□□□□□ -1.85
TPM4P67936 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.5□□□□□ -1.85
TPM4P67936 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.5□□□□□ -1.85
TPM4P67936 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.5□□□□□ -1.85
TPM4P67936 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.5□□□□□ -1.85
TPM4P67936 AL390023.1-201ENST00000428836 262 ntBASIC3.5□□□□□ -1.85
TPM4P67936 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC3.5□□□□□ -1.85
TPM4P67936 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC3.5□□□□□ -1.85
TPM4P67936 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.5□□□□□ -1.85
TPM4P67936 AC122718.1-201ENST00000439448 744 ntBASIC3.5□□□□□ -1.85
TPM4P67936 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
TPM4P67936 ELOCP23-201ENST00000452014 332 ntBASIC3.5□□□□□ -1.85
TPM4P67936 AC104308.1-201ENST00000454621 333 ntBASIC3.5□□□□□ -1.85
TPM4P67936 RPL7P15-201ENST00000461190 712 ntBASIC3.5□□□□□ -1.85
TPM4P67936 AL161747.1-201ENST00000480068 358 ntBASIC3.5□□□□□ -1.85
TPM4P67936 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.5□□□□□ -1.85
TPM4P67936 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.5□□□□□ -1.85
TPM4P67936 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.5□□□□□ -1.85
TPM4P67936 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.5□□□□□ -1.85
TPM4P67936 MTCYBP41-201ENST00000528913 1123 ntBASIC3.5□□□□□ -1.85
TPM4P67936 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.5□□□□□ -1.85
TPM4P67936 GTF2IP22-201ENST00000554443 182 ntBASIC3.5□□□□□ -1.85
TPM4P67936 AL121594.4-201ENST00000556211 1196 ntBASIC3.5□□□□□ -1.85
TPM4P67936 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.5□□□□□ -1.85
TPM4P67936 MIR4443-201ENST00000585052 53 ntBASIC3.5□□□□□ -1.85
TPM4P67936 AC006023.2-201ENST00000609916 167 ntBASIC3.5□□□□□ -1.85
TPM4P67936 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.5□□□□□ -1.85
TPM4P67936 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
TPM4P67936 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
TPM4P67936 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TPM4P67936 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
TPM4P67936 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TPM4P67936 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TPM4P67936 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TPM4P67936 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
TPM4P67936 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.5□□□□□ -1.85
TPM4P67936 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.49□□□□□ -1.85
TPM4P67936 ZNF285B-201ENST00000561698 1767 ntBASIC3.49□□□□□ -1.85
TPM4P67936 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TPM4P67936 AC117529.2-201ENST00000512159 2068 ntBASIC3.49□□□□□ -1.85
TPM4P67936 RNU6-670P-201ENST00000364312 104 ntBASIC3.49□□□□□ -1.85
TPM4P67936 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TPM4P67936 RNU6-452P-201ENST00000384406 107 ntBASIC3.49□□□□□ -1.85
TPM4P67936 RPL31P1-201ENST00000398116 372 ntBASIC3.49□□□□□ -1.85
TPM4P67936 AC110754.1-201ENST00000399740 601 ntBASIC3.49□□□□□ -1.85
TPM4P67936 PSMA2P3-201ENST00000429685 675 ntBASIC3.49□□□□□ -1.85
TPM4P67936 VDAC1P3-201ENST00000434069 851 ntBASIC3.49□□□□□ -1.85
TPM4P67936 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TPM4P67936 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.49□□□□□ -1.85
TPM4P67936 AL627224.1-201ENST00000448334 444 ntBASIC3.49□□□□□ -1.85
TPM4P67936 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.49□□□□□ -1.85
TPM4P67936 NF1P3-201ENST00000457709 450 ntBASIC3.49□□□□□ -1.85
TPM4P67936 ARPC3P2-201ENST00000457786 533 ntBASIC3.49□□□□□ -1.85
TPM4P67936 AP000926.3-201ENST00000497201 299 ntBASIC3.49□□□□□ -1.85
TPM4P67936 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
TPM4P67936 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.49□□□□□ -1.85
TPM4P67936 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.49□□□□□ -1.85
TPM4P67936 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.49□□□□□ -1.85
TPM4P67936 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.49□□□□□ -1.85
TPM4P67936 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.49□□□□□ -1.85
TPM4P67936 MIR4474-201ENST00000579189 78 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms