Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AL591503.2-201ENST00000442314 1005 ntBASIC6.06□□□□□ -1.44
RAPGEF3O95398 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC6.06□□□□□ -1.44
RAPGEF3O95398 MTND1P16-201ENST00000465177 898 ntBASIC6.06□□□□□ -1.44
RAPGEF3O95398 RPS27P23-201ENST00000487608 251 ntBASIC6.06□□□□□ -1.44
RAPGEF3O95398 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC6.06□□□□□ -1.44
RAPGEF3O95398 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC6.06□□□□□ -1.44
RAPGEF3O95398 snoU109.6-201ENST00000516831 118 ntBASIC6.06□□□□□ -1.44
RAPGEF3O95398 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.06□□□□□ -1.44
RAPGEF3O95398 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.06□□□□□ -1.44
RAPGEF3O95398 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.06□□□□□ -1.44
RAPGEF3O95398 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.06□□□□□ -1.44
RAPGEF3O95398 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
RAPGEF3O95398 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RAPGEF3O95398 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC6.06□□□□□ -1.44
RAPGEF3O95398 Z69908.1-201ENST00000622603 247 ntBASIC6.06□□□□□ -1.44
RAPGEF3O95398 AF246928.1-201ENST00000623768 87 ntBASIC6.06□□□□□ -1.44
RAPGEF3O95398 AP003072.4-201ENST00000624580 310 ntBASIC6.06□□□□□ -1.44
RAPGEF3O95398 CR392039.4-201ENST00000624968 501 ntBASIC6.06□□□□□ -1.44
RAPGEF3O95398 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RAPGEF3O95398 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
RAPGEF3O95398 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RAPGEF3O95398 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RAPGEF3O95398 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
RAPGEF3O95398 AC083843.2-201ENST00000568248 6253 ntBASIC6.06□□□□□ -1.44
RAPGEF3O95398 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RAPGEF3O95398 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.06□□□□□ -1.44
RAPGEF3O95398 AC073136.1-201ENST00000449426 2884 ntBASIC6.05□□□□□ -1.44
RAPGEF3O95398 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RAPGEF3O95398 AC087359.1-201ENST00000508335 1740 ntBASIC6.05□□□□□ -1.44
RAPGEF3O95398 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
RAPGEF3O95398 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RAPGEF3O95398 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RAPGEF3O95398 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RAPGEF3O95398 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
RAPGEF3O95398 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RAPGEF3O95398 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RAPGEF3O95398 AL512646.1-201ENST00000269395 1077 ntBASIC6.05□□□□□ -1.44
RAPGEF3O95398 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RAPGEF3O95398 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC6.05□□□□□ -1.44
RAPGEF3O95398 RNU6-1279P-201ENST00000383917 103 ntBASIC6.05□□□□□ -1.44
RAPGEF3O95398 MIR128-1-201ENST00000384921 82 ntBASIC6.05□□□□□ -1.44
RAPGEF3O95398 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
RAPGEF3O95398 AC096664.2-201ENST00000411843 406 ntBASIC6.05□□□□□ -1.44
RAPGEF3O95398 AL161449.1-201ENST00000414531 1199 ntBASIC6.05□□□□□ -1.44
RAPGEF3O95398 HSFY4P-201ENST00000415994 1181 ntBASIC6.05□□□□□ -1.44
RAPGEF3O95398 Z97055.1-201ENST00000419730 712 ntBASIC6.05□□□□□ -1.44
RAPGEF3O95398 AL022400.1-201ENST00000423946 935 ntBASIC6.05□□□□□ -1.44
RAPGEF3O95398 MTND1P20-201ENST00000430341 950 ntBASIC6.05□□□□□ -1.44
RAPGEF3O95398 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC6.05□□□□□ -1.44
RAPGEF3O95398 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC6.05□□□□□ -1.44
RAPGEF3O95398 COX6CP18-201ENST00000448769 222 ntBASIC6.05□□□□□ -1.44
RAPGEF3O95398 CYCSP35-201ENST00000451978 304 ntBASIC6.05□□□□□ -1.44
RAPGEF3O95398 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.05□□□□□ -1.44
RAPGEF3O95398 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC6.05□□□□□ -1.44
RAPGEF3O95398 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC6.05□□□□□ -1.44
RAPGEF3O95398 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC6.05□□□□□ -1.44
RAPGEF3O95398 RNU6-678P-201ENST00000516832 109 ntBASIC6.05□□□□□ -1.44
RAPGEF3O95398 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.05□□□□□ -1.44
RAPGEF3O95398 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.05□□□□□ -1.44
RAPGEF3O95398 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC6.05□□□□□ -1.44
RAPGEF3O95398 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.05□□□□□ -1.44
RAPGEF3O95398 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RAPGEF3O95398 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC6.05□□□□□ -1.44
RAPGEF3O95398 REXO2-218ENST00000544827 880 ntTSL 3 BASIC6.05□□□□□ -1.44
RAPGEF3O95398 AC091516.1-201ENST00000549191 703 ntBASIC6.05□□□□□ -1.44
RAPGEF3O95398 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC6.05□□□□□ -1.44
RAPGEF3O95398 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC6.05□□□□□ -1.44
RAPGEF3O95398 AC025627.2-201ENST00000576220 160 ntBASIC6.05□□□□□ -1.44
RAPGEF3O95398 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC6.05□□□□□ -1.44
RAPGEF3O95398 AC124312.6-202ENST00000623624 418 ntBASIC6.05□□□□□ -1.44
RAPGEF3O95398 AC091965.5-201ENST00000624785 342 ntBASIC6.05□□□□□ -1.44
RAPGEF3O95398 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC6.05□□□□□ -1.44
RAPGEF3O95398 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RAPGEF3O95398 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RAPGEF3O95398 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC6.05□□□□□ -1.44
RAPGEF3O95398 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RAPGEF3O95398 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RAPGEF3O95398 AL672167.1-205ENST00000641112 3080 ntBASIC6.04□□□□□ -1.44
RAPGEF3O95398 AC104623.2-202ENST00000623477 4002 ntBASIC6.04□□□□□ -1.44
RAPGEF3O95398 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RAPGEF3O95398 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RAPGEF3O95398 NOL8P1-201ENST00000508336 3529 ntBASIC6.04□□□□□ -1.44
RAPGEF3O95398 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RAPGEF3O95398 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RAPGEF3O95398 RNU6-1066P-201ENST00000363573 105 ntBASIC6.04□□□□□ -1.44
RAPGEF3O95398 MAP1LC3BP1-201ENST00000417653 379 ntBASIC6.04□□□□□ -1.44
RAPGEF3O95398 AL158156.1-201ENST00000422509 473 ntBASIC6.04□□□□□ -1.44
RAPGEF3O95398 AL591419.1-201ENST00000427423 339 ntBASIC6.04□□□□□ -1.44
RAPGEF3O95398 DYNLL1P7-201ENST00000429273 258 ntBASIC6.04□□□□□ -1.44
RAPGEF3O95398 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC6.04□□□□□ -1.44
RAPGEF3O95398 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC6.04□□□□□ -1.44
RAPGEF3O95398 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RAPGEF3O95398 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RAPGEF3O95398 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC6.04□□□□□ -1.44
RAPGEF3O95398 MTCO2P18-201ENST00000457151 658 ntBASIC6.04□□□□□ -1.44
RAPGEF3O95398 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC6.04□□□□□ -1.44
RAPGEF3O95398 AC005178.1-201ENST00000508392 440 ntBASIC6.04□□□□□ -1.44
RAPGEF3O95398 DEFB109D-201ENST00000529497 240 ntBASIC6.04□□□□□ -1.44
RAPGEF3O95398 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RAPGEF3O95398 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms