Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.89□□□□□ -1.79
PEX3P56589 AC007537.2-201ENST00000472093 511 ntBASIC3.89□□□□□ -1.79
PEX3P56589 TRBV8-2-201ENST00000475637 270 ntBASIC3.89□□□□□ -1.79
PEX3P56589 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.89□□□□□ -1.79
PEX3P56589 SNORA70.14-201ENST00000516205 110 ntBASIC3.89□□□□□ -1.79
PEX3P56589 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.89□□□□□ -1.79
PEX3P56589 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.89□□□□□ -1.79
PEX3P56589 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.89□□□□□ -1.79
PEX3P56589 AL121576.1-201ENST00000556055 276 ntBASIC3.89□□□□□ -1.79
PEX3P56589 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.89□□□□□ -1.79
PEX3P56589 AC010735.1-201ENST00000567305 1026 ntBASIC3.89□□□□□ -1.79
PEX3P56589 AC115085.1-201ENST00000588924 229 ntBASIC3.89□□□□□ -1.79
PEX3P56589 AC245884.10-201ENST00000597355 337 ntBASIC3.89□□□□□ -1.79
PEX3P56589 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.89□□□□□ -1.79
PEX3P56589 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.89□□□□□ -1.79
PEX3P56589 U3.45-201ENST00000607547 219 ntBASIC3.89□□□□□ -1.79
PEX3P56589 AC123768.4-201ENST00000616244 701 ntBASIC3.89□□□□□ -1.79
PEX3P56589 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.89□□□□□ -1.79
PEX3P56589 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.89□□□□□ -1.79
PEX3P56589 AC244258.1-201ENST00000637553 1071 ntBASIC3.89□□□□□ -1.79
PEX3P56589 AL392088.2-201ENST00000637607 285 ntBASIC3.89□□□□□ -1.79
PEX3P56589 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC3.89□□□□□ -1.79
PEX3P56589 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PEX3P56589 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PEX3P56589 AC104446.1-201ENST00000613728 1321 ntBASIC3.89□□□□□ -1.79
PEX3P56589 AC022031.1-201ENST00000585985 2593 ntBASIC3.89□□□□□ -1.79
PEX3P56589 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.89□□□□□ -1.79
PEX3P56589 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
PEX3P56589 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PEX3P56589 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PEX3P56589 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PEX3P56589 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PEX3P56589 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PEX3P56589 SNORA71.3-201ENST00000362582 128 ntBASIC3.88□□□□□ -1.79
PEX3P56589 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
PEX3P56589 RPL7P53-201ENST00000421245 739 ntBASIC3.88□□□□□ -1.79
PEX3P56589 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.88□□□□□ -1.79
PEX3P56589 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.88□□□□□ -1.79
PEX3P56589 ATP5JP1-201ENST00000431631 322 ntBASIC3.88□□□□□ -1.79
PEX3P56589 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.88□□□□□ -1.79
PEX3P56589 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.88□□□□□ -1.79
PEX3P56589 TPMTP4-201ENST00000450749 678 ntBASIC3.88□□□□□ -1.79
PEX3P56589 CDC42P1-201ENST00000456658 548 ntBASIC3.88□□□□□ -1.79
PEX3P56589 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.88□□□□□ -1.79
PEX3P56589 U3.44-201ENST00000458938 192 ntBASIC3.88□□□□□ -1.79
PEX3P56589 AC104982.1-201ENST00000478775 574 ntBASIC3.88□□□□□ -1.79
PEX3P56589 AC025518.1-201ENST00000479856 347 ntBASIC3.88□□□□□ -1.79
PEX3P56589 RPS3AP50-201ENST00000487064 803 ntBASIC3.88□□□□□ -1.79
PEX3P56589 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.88□□□□□ -1.79
PEX3P56589 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.88□□□□□ -1.79
PEX3P56589 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.88□□□□□ -1.79
PEX3P56589 AC110768.1-201ENST00000509222 400 ntBASIC3.88□□□□□ -1.79
PEX3P56589 RNU2-27P-201ENST00000516185 142 ntBASIC3.88□□□□□ -1.79
PEX3P56589 SCARNA1-201ENST00000517138 166 ntBASIC3.88□□□□□ -1.79
PEX3P56589 SOD1P3-201ENST00000518682 454 ntBASIC3.88□□□□□ -1.79
PEX3P56589 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.88□□□□□ -1.79
PEX3P56589 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PEX3P56589 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.88□□□□□ -1.79
PEX3P56589 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.88□□□□□ -1.79
PEX3P56589 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.88□□□□□ -1.79
PEX3P56589 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.88□□□□□ -1.79
PEX3P56589 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.88□□□□□ -1.79
PEX3P56589 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.88□□□□□ -1.79
PEX3P56589 AL606834.3-201ENST00000602615 496 ntBASIC3.88□□□□□ -1.79
PEX3P56589 AC091057.3-201ENST00000602684 733 ntBASIC3.88□□□□□ -1.79
PEX3P56589 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.88□□□□□ -1.79
PEX3P56589 MIR7851-201ENST00000610611 160 ntBASIC3.88□□□□□ -1.79
PEX3P56589 AL392048.1-201ENST00000613946 534 ntBASIC3.88□□□□□ -1.79
PEX3P56589 AL391261.4-201ENST00000616012 481 ntBASIC3.88□□□□□ -1.79
PEX3P56589 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.88□□□□□ -1.79
PEX3P56589 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PEX3P56589 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC3.88□□□□□ -1.79
PEX3P56589 AL353743.4-201ENST00000422653 1547 ntBASIC3.88□□□□□ -1.79
PEX3P56589 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PEX3P56589 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
PEX3P56589 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.88□□□□□ -1.79
PEX3P56589 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PEX3P56589 CEP170P1-201ENST00000502249 4587 ntBASIC3.88□□□□□ -1.79
PEX3P56589 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PEX3P56589 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.87□□□□□ -1.79
PEX3P56589 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.87□□□□□ -1.79
PEX3P56589 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PEX3P56589 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.87□□□□□ -1.79
PEX3P56589 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PEX3P56589 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PEX3P56589 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PEX3P56589 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PEX3P56589 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PEX3P56589 RNA5SP119-201ENST00000362715 117 ntBASIC3.87□□□□□ -1.79
PEX3P56589 RNA5SP235-201ENST00000365411 114 ntBASIC3.87□□□□□ -1.79
PEX3P56589 RNU6-925P-201ENST00000384629 104 ntBASIC3.87□□□□□ -1.79
PEX3P56589 RNA5SP171-201ENST00000391071 115 ntBASIC3.87□□□□□ -1.79
PEX3P56589 MTATP6P31-201ENST00000406985 692 ntBASIC3.87□□□□□ -1.79
PEX3P56589 VN1R51P-201ENST00000411675 945 ntBASIC3.87□□□□□ -1.79
PEX3P56589 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.87□□□□□ -1.79
PEX3P56589 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.87□□□□□ -1.79
PEX3P56589 AC245052.5-201ENST00000416320 649 ntBASIC3.87□□□□□ -1.79
PEX3P56589 PTP4A1P7-201ENST00000423476 514 ntBASIC3.87□□□□□ -1.79
PEX3P56589 AC092641.1-201ENST00000440229 772 ntBASIC3.87□□□□□ -1.79
PEX3P56589 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms