Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.18□□□□□ -1.9
CX3CR1P49238 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CX3CR1P49238 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CX3CR1P49238 OR4A15-201ENST00000314706 1035 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CX3CR1P49238 RNU6-444P-201ENST00000383988 108 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 MTHFD2P2-201ENST00000407725 247 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 RN7SKP156-201ENST00000410308 342 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 RNU6-77P-201ENST00000410554 91 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.18□□□□□ -1.9
CX3CR1P49238 AC009237.5-201ENST00000414271 501 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 UBE2V1P9-201ENST00000414760 368 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.18□□□□□ -1.9
CX3CR1P49238 RPL21P66-201ENST00000426566 466 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.18□□□□□ -1.9
CX3CR1P49238 AL590103.1-201ENST00000434488 307 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CX3CR1P49238 RPS29P7-201ENST00000439662 171 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 AL645931.1-201ENST00000439737 410 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.18□□□□□ -1.9
CX3CR1P49238 AC005002.1-201ENST00000447458 540 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC3.18□□□□□ -1.9
CX3CR1P49238 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CX3CR1P49238 AC010468.1-201ENST00000461022 817 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.18□□□□□ -1.9
CX3CR1P49238 RN7SL132P-201ENST00000478131 296 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 RPS3AP50-201ENST00000487064 803 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.18□□□□□ -1.9
CX3CR1P49238 AC093853.1-201ENST00000515689 483 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 AP004371.1-201ENST00000525240 214 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.18□□□□□ -1.9
CX3CR1P49238 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.18□□□□□ -1.9
CX3CR1P49238 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.18□□□□□ -1.9
CX3CR1P49238 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.18□□□□□ -1.9
CX3CR1P49238 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.18□□□□□ -1.9
CX3CR1P49238 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.18□□□□□ -1.9
CX3CR1P49238 AC005972.3-201ENST00000606304 481 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 AC092653.1-201ENST00000608509 531 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 AC245100.7-201ENST00000609678 442 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 AC006213.5-201ENST00000619673 288 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.18□□□□□ -1.9
CX3CR1P49238 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.18□□□□□ -1.9
CX3CR1P49238 AL732618.1-201ENST00000623251 301 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 AC073592.7-201ENST00000623659 507 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 U6.98-201ENST00000637157 84 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CX3CR1P49238 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CX3CR1P49238 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
CX3CR1P49238 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CX3CR1P49238 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CX3CR1P49238 AC008432.1-201ENST00000615912 1320 ntBASIC3.18□□□□□ -1.9
CX3CR1P49238 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.17□□□□□ -1.9
CX3CR1P49238 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CX3CR1P49238 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CX3CR1P49238 AC058791.1-201ENST00000608412 3198 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CX3CR1P49238 MTCO1P6-201ENST00000481192 1384 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CX3CR1P49238 RNA5SP235-201ENST00000365411 114 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CX3CR1P49238 RNU6-441P-201ENST00000384545 106 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 RNU6-328P-201ENST00000390887 106 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 FABP12P1-201ENST00000401911 322 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 AL583834.1-201ENST00000406943 343 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 SNORA11B-201ENST00000408175 129 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 RNU4-78P-201ENST00000410940 126 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.17□□□□□ -1.9
CX3CR1P49238 AL445183.3-201ENST00000414168 502 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.17□□□□□ -1.9
CX3CR1P49238 AC019070.1-201ENST00000415008 1024 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CX3CR1P49238 AC007390.1-201ENST00000415722 356 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 AC008173.1-201ENST00000418901 264 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 OFD1P18Y-201ENST00000420889 959 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.17□□□□□ -1.9
CX3CR1P49238 OSTCP5-201ENST00000425293 453 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 RPL7P2-201ENST00000427639 268 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.17□□□□□ -1.9
CX3CR1P49238 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.17□□□□□ -1.9
CX3CR1P49238 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.17□□□□□ -1.9
CX3CR1P49238 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.17□□□□□ -1.9
CX3CR1P49238 AL929288.2-201ENST00000446368 407 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 MTND2P30-201ENST00000456663 382 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.17□□□□□ -1.9
CX3CR1P49238 HMGN2P16-201ENST00000456802 261 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 AL136097.1-201ENST00000456945 913 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 U3.44-201ENST00000458938 192 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 RPL5P24-201ENST00000463742 885 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 ACTG1P13-201ENST00000486987 1043 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.17□□□□□ -1.9
CX3CR1P49238 RN7SKP116-201ENST00000516902 319 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC3.17□□□□□ -1.9
CX3CR1P49238 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.17□□□□□ -1.9
CX3CR1P49238 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.17□□□□□ -1.9
CX3CR1P49238 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.17□□□□□ -1.9
CX3CR1P49238 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.17□□□□□ -1.9
CX3CR1P49238 TGIF1P1-201ENST00000558095 802 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 AC136624.4-201ENST00000573044 370 ntBASIC3.17□□□□□ -1.9
CX3CR1P49238 AC005412.1-201ENST00000580812 1049 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms