Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 MTHFD2P2-201ENST00000407725 247 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 RNU6-295P-201ENST00000516901 104 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 OR4T1P-201ENST00000554933 911 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 AC024153.1-201ENST00000603103 365 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 SNORA70.6-201ENST00000383934 134 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 METTL15P1-201ENST00000481421 1045 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 RPL7P24-201ENST00000493052 752 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 AC005951.1-201ENST00000576706 485 ntBASIC1.28□□□□□ -2.2
MACF1Q9UPN3 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
MACF1Q9UPN3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC1.28□□□□□ -2.21
MACF1Q9UPN3 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
MACF1Q9UPN3 AC093908.1-201ENST00000623125 8092 ntBASIC1.28□□□□□ -2.21
MACF1Q9UPN3 RNVU1-3-201ENST00000364313 161 ntBASIC1.28□□□□□ -2.21
MACF1Q9UPN3 RNU6-72P-201ENST00000384285 79 ntBASIC1.28□□□□□ -2.21
MACF1Q9UPN3 RNU6-851P-201ENST00000384565 107 ntBASIC1.28□□□□□ -2.21
MACF1Q9UPN3 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
MACF1Q9UPN3 KATNBL1P3-201ENST00000443475 909 ntBASIC1.28□□□□□ -2.21
MACF1Q9UPN3 SNRPGP5-201ENST00000456003 220 ntBASIC1.28□□□□□ -2.21
MACF1Q9UPN3 AC092991.1-201ENST00000477176 376 ntBASIC1.28□□□□□ -2.21
MACF1Q9UPN3 RFPL4AP3-201ENST00000515267 345 ntBASIC1.28□□□□□ -2.21
MACF1Q9UPN3 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC1.28□□□□□ -2.21
MACF1Q9UPN3 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC1.28□□□□□ -2.21
MACF1Q9UPN3 AL354943.1-201ENST00000572103 781 ntBASIC1.28□□□□□ -2.21
MACF1Q9UPN3 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.28□□□□□ -2.21
MACF1Q9UPN3 AC234782.5-201ENST00000617723 324 ntBASIC1.28□□□□□ -2.21
MACF1Q9UPN3 PVT1_3.1-201ENST00000620853 95 ntBASIC1.28□□□□□ -2.21
MACF1Q9UPN3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 RN7SKP220-201ENST00000410611 288 ntBASIC1.27□□□□□ -2.21
MACF1Q9UPN3 AL691447.1-201ENST00000419456 387 ntBASIC1.27□□□□□ -2.21
MACF1Q9UPN3 RPS15AP12-201ENST00000419498 388 ntBASIC1.27□□□□□ -2.21
MACF1Q9UPN3 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 COX6CP8-201ENST00000522620 226 ntBASIC1.27□□□□□ -2.21
MACF1Q9UPN3 OR4U1P-201ENST00000554958 912 ntBASIC1.27□□□□□ -2.21
MACF1Q9UPN3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 YES1-203ENST00000577961 4554 ntTSL 5 BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 AC073136.2-201ENST00000417282 849 ntBASIC1.27□□□□□ -2.21
MACF1Q9UPN3 AC005921.1-201ENST00000510589 286 ntBASIC1.27□□□□□ -2.21
MACF1Q9UPN3 PPBPP1-201ENST00000510807 373 ntBASIC1.27□□□□□ -2.21
MACF1Q9UPN3 TRMT112P2-201ENST00000512910 132 ntBASIC1.27□□□□□ -2.21
MACF1Q9UPN3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 AC026333.2-201ENST00000542164 106 ntBASIC1.27□□□□□ -2.21
MACF1Q9UPN3 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 RNY1P10-201ENST00000363268 113 ntBASIC1.27□□□□□ -2.21
MACF1Q9UPN3 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 AL135786.1-201ENST00000415892 214 ntBASIC1.27□□□□□ -2.21
MACF1Q9UPN3 AC108667.1-201ENST00000428618 249 ntBASIC1.27□□□□□ -2.21
MACF1Q9UPN3 AL139415.2-201ENST00000431968 163 ntBASIC1.27□□□□□ -2.21
MACF1Q9UPN3 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 OR4R3P-201ENST00000525084 838 ntBASIC1.27□□□□□ -2.21
MACF1Q9UPN3 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 ZNF702P-202ENST00000434269 1966 ntBASIC1.27□□□□□ -2.21
MACF1Q9UPN3 SNORA36C-201ENST00000384289 132 ntBASIC1.27□□□□□ -2.21
MACF1Q9UPN3 RNY1P14-201ENST00000384426 108 ntBASIC1.27□□□□□ -2.21
MACF1Q9UPN3 AL358075.3-201ENST00000426289 226 ntBASIC1.27□□□□□ -2.21
MACF1Q9UPN3 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC1.27□□□□□ -2.21
MACF1Q9UPN3 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms