Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 OR6K3-202ENST00000368146 996 ntBASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 HMGB1P13-201ENST00000406019 642 ntBASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 AP000567.1-201ENST00000406413 156 ntBASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 MTND2P16-201ENST00000419987 799 ntBASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 MTCO1P45-201ENST00000431457 267 ntBASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 NDUFA5P10-201ENST00000432147 357 ntBASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 SETP5-201ENST00000437270 562 ntBASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 MTCYBP12-201ENST00000440559 1134 ntBASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 CYCSP35-201ENST00000451978 304 ntBASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 FAM133DP-201ENST00000464802 691 ntBASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 AC146507.1-201ENST00000468335 354 ntBASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 AP002884.2-201ENST00000471647 395 ntBASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 RN7SL293P-201ENST00000481765 281 ntBASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 AC073522.1-201ENST00000483312 377 ntBASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 OR5H3P-201ENST00000502817 919 ntBASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 PHBP14-201ENST00000512887 367 ntBASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 MTND4LP24-201ENST00000572277 291 ntBASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 AC011468.4-201ENST00000603942 409 ntBASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 AC011816.2-201ENST00000607089 556 ntBASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 AC117490.2-201ENST00000610042 594 ntBASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 AL161637.1-201ENST00000622380 412 ntBASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VPS29Q9UBQ0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 RPL26P37-201ENST00000411983 438 ntBASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 MTCO1P43-201ENST00000431831 488 ntBASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 CDC27P1-201ENST00000445384 715 ntBASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 ELOCP23-201ENST00000452014 332 ntBASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 AC114967.1-201ENST00000504890 259 ntBASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 HMGB3P15-201ENST00000507326 574 ntBASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 RN7SKP157-201ENST00000516174 282 ntBASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 RNU6-1004P-201ENST00000516584 111 ntBASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 AC068657.1-201ENST00000520807 306 ntBASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 UBE2NP1-201ENST00000545592 458 ntBASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 NCAPGP2-201ENST00000557911 754 ntBASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 AC009464.1-201ENST00000615731 469 ntBASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 AC245389.2-201ENST00000616023 576 ntBASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 AC243756.2-201ENST00000618406 463 ntBASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 AC242843.1-201ENST00000618702 573 ntBASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 PLCE1P1-201ENST00000622094 305 ntBASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 AC021755.1-201ENST00000559747 1447 ntBASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 MTND5P24-201ENST00000438892 1767 ntBASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 AC107081.3-201ENST00000612715 2034 ntBASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 AC004972.1-201ENST00000623934 2209 ntBASIC3.07□□□□□ -1.92
VPS29Q9UBQ0 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 RPL21P133-201ENST00000443666 476 ntBASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 RPL29P29-201ENST00000448725 423 ntBASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 HMGB1P26-201ENST00000452520 628 ntBASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 AC021146.5-201ENST00000503544 545 ntBASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 AC110794.1-201ENST00000505816 425 ntBASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 AC067904.2-201ENST00000517322 1283 ntBASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 IGHV3-76-201ENST00000522465 295 ntBASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 CENPUP2-201ENST00000555897 1186 ntBASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 AL845331.3-202ENST00000562856 261 ntBASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 MIR2682-201ENST00000580305 110 ntBASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 uc_338.25-201ENST00000613756 156 ntBASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
VPS29Q9UBQ0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms