Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 AC141257.3-201ENST00000572906 215 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 SNORA74C-1-201ENST00000580726 201 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 AC090616.5-202ENST00000582111 297 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 AL353997.4-201ENST00000586196 166 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 BBIP1P1-201ENST00000602999 279 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 AL133338.2-201ENST00000604292 736 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 Z94722.1-201ENST00000604328 474 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 AL121932.1-201ENST00000605542 214 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 MIR7844-201ENST00000616161 122 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 AC127502.3-201ENST00000636170 1206 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 DHX40P1-201ENST00000588725 1412 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.44□□□□□ -1.7
LRFN1Q9P244 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRFN1Q9P244 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LRFN1Q9P244 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LRFN1Q9P244 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRFN1Q9P244 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LRFN1Q9P244 AL731532.2-201ENST00000623542 1953 ntBASIC4.44□□□□□ -1.7
LRFN1Q9P244 AC027287.1-201ENST00000553115 1453 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.43□□□□□ -1.7
LRFN1Q9P244 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
LRFN1Q9P244 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LRFN1Q9P244 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LRFN1Q9P244 OR52B1P-201ENST00000316506 909 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC126755.2-208ENST00000327792 462 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC138969.1-213ENST00000331436 462 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 RNU6-28P-201ENST00000362378 107 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LRFN1Q9P244 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.43□□□□□ -1.7
LRFN1Q9P244 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.43□□□□□ -1.7
LRFN1Q9P244 Z99497.1-201ENST00000421282 135 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC009480.2-201ENST00000422916 432 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC092162.1-201ENST00000432828 434 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC016831.4-201ENST00000438302 307 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 ISCA1P2-201ENST00000438679 421 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 SDCBPP1-201ENST00000440192 890 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.43□□□□□ -1.7
LRFN1Q9P244 CYCSP24-201ENST00000445119 316 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.43□□□□□ -1.7
LRFN1Q9P244 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC010468.1-201ENST00000461022 817 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC010326.1-201ENST00000462726 602 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 SETP11-201ENST00000473027 690 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC104563.1-201ENST00000476147 376 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC105313.1-201ENST00000509121 353 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC093677.1-201ENST00000514414 678 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 OR5AP1P-201ENST00000529730 940 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC068587.4-201ENST00000533893 186 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC024224.1-201ENST00000538284 609 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 PSMB7P1-201ENST00000556349 514 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.43□□□□□ -1.7
LRFN1Q9P244 MIR3915-201ENST00000578518 97 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.43□□□□□ -1.7
LRFN1Q9P244 HMGN2P28-201ENST00000606102 262 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.43□□□□□ -1.7
LRFN1Q9P244 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC106028.5-201ENST00000610332 395 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 AL022401.1-201ENST00000619498 108 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 AC006927.3-201ENST00000638789 384 ntBASIC4.43□□□□□ -1.7
LRFN1Q9P244 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LRFN1Q9P244 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LRFN1Q9P244 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
LRFN1Q9P244 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
LRFN1Q9P244 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.43□□□□□ -1.7
LRFN1Q9P244 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LRFN1Q9P244 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
LRFN1Q9P244 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LRFN1Q9P244 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 AL031985.3-201ENST00000565390 2449 ntBASIC4.42□□□□□ -1.7
LRFN1Q9P244 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.42□□□□□ -1.7
LRFN1Q9P244 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
LRFN1Q9P244 RNU6-660P-201ENST00000364566 109 ntBASIC4.42□□□□□ -1.7
LRFN1Q9P244 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
LRFN1Q9P244 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LRFN1Q9P244 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
LRFN1Q9P244 Y_RNA.560-201ENST00000384689 102 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms