Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
VAPAQ9P0L0 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.18□□□□□ -1.9
VAPAQ9P0L0 RNU1-68P-201ENST00000615382 146 ntBASIC3.18□□□□□ -1.9
VAPAQ9P0L0 U1.39-201ENST00000621562 146 ntBASIC3.18□□□□□ -1.9
VAPAQ9P0L0 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.18□□□□□ -1.9
VAPAQ9P0L0 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.18□□□□□ -1.9
VAPAQ9P0L0 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.18□□□□□ -1.9
VAPAQ9P0L0 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.18□□□□□ -1.9
VAPAQ9P0L0 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.18□□□□□ -1.9
VAPAQ9P0L0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
VAPAQ9P0L0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VAPAQ9P0L0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
VAPAQ9P0L0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.17□□□□□ -1.9
VAPAQ9P0L0 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
VAPAQ9P0L0 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.17□□□□□ -1.9
VAPAQ9P0L0 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VAPAQ9P0L0 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
VAPAQ9P0L0 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.17□□□□□ -1.9
VAPAQ9P0L0 MIR607-201ENST00000385241 96 ntBASIC3.17□□□□□ -1.9
VAPAQ9P0L0 AP000567.1-201ENST00000406413 156 ntBASIC3.17□□□□□ -1.9
VAPAQ9P0L0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
VAPAQ9P0L0 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.17□□□□□ -1.9
VAPAQ9P0L0 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VAPAQ9P0L0 AC244098.2-201ENST00000422068 99 ntBASIC3.17□□□□□ -1.9
VAPAQ9P0L0 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.17□□□□□ -1.9
VAPAQ9P0L0 AC004975.1-201ENST00000428733 208 ntBASIC3.17□□□□□ -1.9
VAPAQ9P0L0 CYCSP4-201ENST00000429682 331 ntBASIC3.17□□□□□ -1.9
VAPAQ9P0L0 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.17□□□□□ -1.9
VAPAQ9P0L0 Z77249.1-201ENST00000444622 1175 ntBASIC3.17□□□□□ -1.9
VAPAQ9P0L0 SLC31A1P1-201ENST00000451221 567 ntBASIC3.17□□□□□ -1.9
VAPAQ9P0L0 AL513343.1-201ENST00000451818 792 ntBASIC3.17□□□□□ -1.9
VAPAQ9P0L0 NUTF2P7-201ENST00000453086 375 ntBASIC3.17□□□□□ -1.9
VAPAQ9P0L0 RPL23AP55-201ENST00000498163 452 ntBASIC3.17□□□□□ -1.9
VAPAQ9P0L0 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.17□□□□□ -1.9
VAPAQ9P0L0 RN7SKP96-201ENST00000516948 297 ntBASIC3.17□□□□□ -1.9
VAPAQ9P0L0 RPL12P22-201ENST00000519073 490 ntBASIC3.17□□□□□ -1.9
VAPAQ9P0L0 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.17□□□□□ -1.9
VAPAQ9P0L0 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.17□□□□□ -1.9
VAPAQ9P0L0 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
VAPAQ9P0L0 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.17□□□□□ -1.9
VAPAQ9P0L0 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.17□□□□□ -1.9
VAPAQ9P0L0 AC090616.5-202ENST00000582111 297 ntBASIC3.17□□□□□ -1.9
VAPAQ9P0L0 SNRPGP15-201ENST00000600149 222 ntBASIC3.17□□□□□ -1.9
VAPAQ9P0L0 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.17□□□□□ -1.9
VAPAQ9P0L0 AC127502.3-201ENST00000636170 1206 ntBASIC3.17□□□□□ -1.9
VAPAQ9P0L0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.17□□□□□ -1.9
VAPAQ9P0L0 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VAPAQ9P0L0 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VAPAQ9P0L0 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
VAPAQ9P0L0 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.16□□□□□ -1.9
VAPAQ9P0L0 ELL2P4-201ENST00000446870 1376 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VAPAQ9P0L0 CR383658.2-201ENST00000547576 1525 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.16□□□□□ -1.9
VAPAQ9P0L0 RNU6-40P-201ENST00000384254 107 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 RN7SKP111-201ENST00000410349 271 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.16□□□□□ -1.9
VAPAQ9P0L0 TRIAP1P1-201ENST00000427062 225 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 ATP5JP1-201ENST00000431631 322 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VAPAQ9P0L0 AL662791.1-201ENST00000441992 928 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 NOTCH2P1-201ENST00000443481 624 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 RPS15AP29-201ENST00000445539 400 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 TPT1P12-201ENST00000448968 492 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 AC073387.1-201ENST00000453261 709 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 RPS27P29-201ENST00000463110 252 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 AC092754.2-201ENST00000463506 460 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.16□□□□□ -1.9
VAPAQ9P0L0 RPL31P13-201ENST00000484151 370 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 AC114967.1-201ENST00000504890 259 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 AC016065.2-201ENST00000514530 444 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 OR4R3P-201ENST00000525084 838 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.16□□□□□ -1.9
VAPAQ9P0L0 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.16□□□□□ -1.9
VAPAQ9P0L0 GTF2IP22-201ENST00000554443 182 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 OR4T1P-201ENST00000554933 911 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.16□□□□□ -1.9
VAPAQ9P0L0 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.16□□□□□ -1.9
VAPAQ9P0L0 AC136624.4-201ENST00000573044 370 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.16□□□□□ -1.9
VAPAQ9P0L0 AC006557.5-201ENST00000603126 811 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 AC018618.2-201ENST00000604770 446 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 AL451086.1-201ENST00000605596 223 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.16□□□□□ -1.9
VAPAQ9P0L0 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.16□□□□□ -1.9
VAPAQ9P0L0 AC099676.1-201ENST00000608886 657 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 AC009032.1-201ENST00000617574 431 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.16□□□□□ -1.9
VAPAQ9P0L0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
VAPAQ9P0L0 U6.107-201ENST00000637108 79 ntBASIC3.16□□□□□ -1.9
VAPAQ9P0L0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.16□□□□□ -1.9
VAPAQ9P0L0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
VAPAQ9P0L0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
VAPAQ9P0L0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
VAPAQ9P0L0 AL356274.2-201ENST00000624379 3752 ntBASIC3.15□□□□□ -1.9
VAPAQ9P0L0 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
VAPAQ9P0L0 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
VAPAQ9P0L0 U3.11-201ENST00000364476 212 ntBASIC3.15□□□□□ -1.91
VAPAQ9P0L0 OR52E6-202ENST00000379946 954 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms