Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 MTATP6P31-201ENST00000406985 692 ntBASIC4.02□□□□□ -1.77
VCPP55072 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.02□□□□□ -1.77
VCPP55072 RPS7P15-201ENST00000415804 584 ntBASIC4.02□□□□□ -1.77
VCPP55072 AL158050.1-201ENST00000416077 457 ntBASIC4.02□□□□□ -1.77
VCPP55072 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VCPP55072 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.02□□□□□ -1.77
VCPP55072 AC023128.2-201ENST00000420880 1223 ntBASIC4.02□□□□□ -1.77
VCPP55072 AL591419.1-201ENST00000427423 339 ntBASIC4.02□□□□□ -1.77
VCPP55072 RPS26P40-201ENST00000435209 294 ntBASIC4.02□□□□□ -1.77
VCPP55072 Z74696.2-201ENST00000436514 498 ntBASIC4.02□□□□□ -1.77
VCPP55072 AL138799.3-201ENST00000438968 350 ntBASIC4.02□□□□□ -1.77
VCPP55072 AC092685.1-201ENST00000447960 1243 ntBASIC4.02□□□□□ -1.77
VCPP55072 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.02□□□□□ -1.77
VCPP55072 CEACAMP4-201ENST00000457676 421 ntBASIC4.02□□□□□ -1.77
VCPP55072 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
VCPP55072 RPS27AP1-201ENST00000475545 471 ntBASIC4.02□□□□□ -1.77
VCPP55072 RN7SKP18-201ENST00000516005 275 ntBASIC4.02□□□□□ -1.77
VCPP55072 NARSP2-201ENST00000518524 679 ntBASIC4.02□□□□□ -1.77
VCPP55072 AC022695.1-201ENST00000522089 237 ntBASIC4.02□□□□□ -1.77
VCPP55072 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VCPP55072 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.02□□□□□ -1.77
VCPP55072 AC113192.3-201ENST00000529152 742 ntBASIC4.02□□□□□ -1.77
VCPP55072 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.02□□□□□ -1.77
VCPP55072 AC007458.1-201ENST00000542812 373 ntBASIC4.02□□□□□ -1.77
VCPP55072 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.02□□□□□ -1.77
VCPP55072 AC093510.2-201ENST00000562820 896 ntBASIC4.02□□□□□ -1.77
VCPP55072 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.02□□□□□ -1.77
VCPP55072 AC007687.1-201ENST00000602704 304 ntBASIC4.02□□□□□ -1.77
VCPP55072 MIR8058-201ENST00000615737 89 ntBASIC4.02□□□□□ -1.77
VCPP55072 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
VCPP55072 AF001550.2-201ENST00000636643 217 ntBASIC4.02□□□□□ -1.77
VCPP55072 AL392088.2-201ENST00000637607 285 ntBASIC4.02□□□□□ -1.77
VCPP55072 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
VCPP55072 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.02□□□□□ -1.77
VCPP55072 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VCPP55072 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.02□□□□□ -1.77
VCPP55072 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VCPP55072 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
VCPP55072 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.02□□□□□ -1.77
VCPP55072 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.02□□□□□ -1.77
VCPP55072 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
VCPP55072 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
VCPP55072 SNORD6-201ENST00000365444 73 ntBASIC4.01□□□□□ -1.77
VCPP55072 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.01□□□□□ -1.77
VCPP55072 U1.1-201ENST00000384101 164 ntBASIC4.01□□□□□ -1.77
VCPP55072 AL606495.1-201ENST00000422100 813 ntBASIC4.01□□□□□ -1.77
VCPP55072 UBE2D3P3-201ENST00000426992 425 ntBASIC4.01□□□□□ -1.77
VCPP55072 AC005189.1-201ENST00000431286 310 ntBASIC4.01□□□□□ -1.77
VCPP55072 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC4.01□□□□□ -1.77
VCPP55072 RPS3AP6-201ENST00000484430 795 ntBASIC4.01□□□□□ -1.77
VCPP55072 RPL32P34-201ENST00000486380 400 ntBASIC4.01□□□□□ -1.77
VCPP55072 PTGES3P3-201ENST00000511479 482 ntBASIC4.01□□□□□ -1.77
VCPP55072 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.01□□□□□ -1.77
VCPP55072 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC4.01□□□□□ -1.77
VCPP55072 MTCO1P30-201ENST00000515244 580 ntBASIC4.01□□□□□ -1.77
VCPP55072 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.01□□□□□ -1.77
VCPP55072 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.01□□□□□ -1.77
VCPP55072 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VCPP55072 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.01□□□□□ -1.77
VCPP55072 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.01□□□□□ -1.77
VCPP55072 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.01□□□□□ -1.77
VCPP55072 AC006960.3-201ENST00000561845 705 ntBASIC4.01□□□□□ -1.77
VCPP55072 AL133457.1-201ENST00000564251 987 ntBASIC4.01□□□□□ -1.77
VCPP55072 RNA5SP108-201ENST00000605921 117 ntBASIC4.01□□□□□ -1.77
VCPP55072 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.01□□□□□ -1.77
VCPP55072 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.01□□□□□ -1.77
VCPP55072 AC012531.5-201ENST00000611375 151 ntBASIC4.01□□□□□ -1.77
VCPP55072 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.01□□□□□ -1.77
VCPP55072 MIR8084-201ENST00000614105 89 ntBASIC4.01□□□□□ -1.77
VCPP55072 MIR6864-201ENST00000617935 70 ntBASIC4.01□□□□□ -1.77
VCPP55072 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.01□□□□□ -1.77
VCPP55072 AC083865.1-201ENST00000636634 831 ntBASIC4.01□□□□□ -1.77
VCPP55072 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
VCPP55072 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VCPP55072 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
VCPP55072 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4□□□□□ -1.77
VCPP55072 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4□□□□□ -1.77
VCPP55072 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
VCPP55072 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VCPP55072 METTL21EP-201ENST00000298105 713 ntBASIC4□□□□□ -1.77
VCPP55072 MIR16-2-201ENST00000362117 81 ntBASIC4□□□□□ -1.77
VCPP55072 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4□□□□□ -1.77
VCPP55072 MIR199A2-201ENST00000385289 110 ntBASIC4□□□□□ -1.77
VCPP55072 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC4□□□□□ -1.77
VCPP55072 Z98941.1-201ENST00000407764 100 ntBASIC4□□□□□ -1.77
VCPP55072 RHEBP3-201ENST00000411920 351 ntBASIC4□□□□□ -1.77
VCPP55072 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4□□□□□ -1.77
VCPP55072 OR5AW1P-201ENST00000426334 1006 ntBASIC4□□□□□ -1.77
VCPP55072 AC017083.1-201ENST00000428093 483 ntBASIC4□□□□□ -1.77
VCPP55072 UBE2V1P6-201ENST00000430840 422 ntBASIC4□□□□□ -1.77
VCPP55072 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4□□□□□ -1.77
VCPP55072 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4□□□□□ -1.77
VCPP55072 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4□□□□□ -1.77
VCPP55072 AC098824.1-201ENST00000453565 980 ntBASIC4□□□□□ -1.77
VCPP55072 RPL21P11-201ENST00000461458 483 ntBASIC4□□□□□ -1.77
VCPP55072 TMED11P-201ENST00000479478 690 ntBASIC4□□□□□ -1.77
VCPP55072 AC092451.1-201ENST00000480211 153 ntBASIC4□□□□□ -1.77
VCPP55072 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4□□□□□ -1.77
VCPP55072 TRAV31-201ENST00000502780 342 ntBASIC4□□□□□ -1.77
VCPP55072 MTCO2P9-201ENST00000503214 694 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms