Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.29□□□□□ -1.88
RPA3P35244 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.29□□□□□ -1.88
RPA3P35244 APOOP4-201ENST00000513530 597 ntBASIC3.29□□□□□ -1.88
RPA3P35244 IGKV2-26-201ENST00000518305 343 ntBASIC3.29□□□□□ -1.88
RPA3P35244 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.29□□□□□ -1.88
RPA3P35244 AP002812.4-201ENST00000532139 286 ntBASIC3.29□□□□□ -1.88
RPA3P35244 AC074029.2-201ENST00000551045 634 ntBASIC3.29□□□□□ -1.88
RPA3P35244 EIF1AXP2-201ENST00000555940 413 ntBASIC3.29□□□□□ -1.88
RPA3P35244 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.29□□□□□ -1.88
RPA3P35244 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.29□□□□□ -1.88
RPA3P35244 AC011816.2-201ENST00000607089 556 ntBASIC3.29□□□□□ -1.88
RPA3P35244 AC019176.2-201ENST00000611579 315 ntBASIC3.29□□□□□ -1.88
RPA3P35244 AL356321.1-201ENST00000621360 228 ntBASIC3.29□□□□□ -1.88
RPA3P35244 AF117829.1-206ENST00000621883 3802 ntBASIC3.29□□□□□ -1.88
RPA3P35244 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.29□□□□□ -1.88
RPA3P35244 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.29□□□□□ -1.88
RPA3P35244 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RPA3P35244 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RPA3P35244 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.29□□□□□ -1.88
RPA3P35244 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RPA3P35244 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RPA3P35244 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RPA3P35244 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
RPA3P35244 EXOC5P1-201ENST00000510543 1969 ntBASIC3.29□□□□□ -1.88
RPA3P35244 HSPA8P19-201ENST00000505359 1517 ntBASIC3.29□□□□□ -1.88
RPA3P35244 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RPA3P35244 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.28□□□□□ -1.88
RPA3P35244 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RPA3P35244 RNU6-819P-201ENST00000364116 107 ntBASIC3.28□□□□□ -1.88
RPA3P35244 RPS7P15-201ENST00000415804 584 ntBASIC3.28□□□□□ -1.88
RPA3P35244 HSFY4P-201ENST00000415994 1181 ntBASIC3.28□□□□□ -1.88
RPA3P35244 AC234782.4-201ENST00000417646 1048 ntBASIC3.28□□□□□ -1.88
RPA3P35244 OR1AA1P-201ENST00000419597 916 ntBASIC3.28□□□□□ -1.88
RPA3P35244 AC023347.2-201ENST00000433994 462 ntBASIC3.28□□□□□ -1.88
RPA3P35244 AL138799.3-201ENST00000438968 350 ntBASIC3.28□□□□□ -1.88
RPA3P35244 RPL34P26-201ENST00000445636 354 ntBASIC3.28□□□□□ -1.88
RPA3P35244 HMGN2P21-201ENST00000447764 270 ntBASIC3.28□□□□□ -1.88
RPA3P35244 TVP23BP2-201ENST00000455082 615 ntBASIC3.28□□□□□ -1.88
RPA3P35244 HMGB3P30-201ENST00000457863 606 ntBASIC3.28□□□□□ -1.88
RPA3P35244 RN7SL75P-201ENST00000461926 281 ntBASIC3.28□□□□□ -1.88
RPA3P35244 RN7SL330P-201ENST00000469709 307 ntBASIC3.28□□□□□ -1.88
RPA3P35244 ST13P14-201ENST00000474095 734 ntBASIC3.28□□□□□ -1.88
RPA3P35244 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.28□□□□□ -1.88
RPA3P35244 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.28□□□□□ -1.88
RPA3P35244 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.28□□□□□ -1.88
RPA3P35244 RN7SKP234-201ENST00000517173 224 ntBASIC3.28□□□□□ -1.88
RPA3P35244 RNA5SP380-201ENST00000517190 98 ntBASIC3.28□□□□□ -1.88
RPA3P35244 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RPA3P35244 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.28□□□□□ -1.88
RPA3P35244 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.28□□□□□ -1.88
RPA3P35244 AP000619.3-201ENST00000535634 1127 ntBASIC3.28□□□□□ -1.88
RPA3P35244 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.28□□□□□ -1.88
RPA3P35244 AC007458.1-201ENST00000542812 373 ntBASIC3.28□□□□□ -1.88
RPA3P35244 AC011611.1-201ENST00000552179 197 ntBASIC3.28□□□□□ -1.88
RPA3P35244 RN7SL339P-201ENST00000580597 296 ntBASIC3.28□□□□□ -1.88
RPA3P35244 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.28□□□□□ -1.88
RPA3P35244 AC245389.2-201ENST00000616023 576 ntBASIC3.28□□□□□ -1.88
RPA3P35244 AC121761.2-201ENST00000617300 689 ntBASIC3.28□□□□□ -1.88
RPA3P35244 AC243756.2-201ENST00000618406 463 ntBASIC3.28□□□□□ -1.88
RPA3P35244 AC242843.1-201ENST00000618702 573 ntBASIC3.28□□□□□ -1.88
RPA3P35244 AC091903.1-201ENST00000624322 454 ntBASIC3.28□□□□□ -1.88
RPA3P35244 OR8B1P-202ENST00000641132 1178 ntBASIC3.28□□□□□ -1.88
RPA3P35244 AL356274.2-201ENST00000624379 3752 ntBASIC3.28□□□□□ -1.88
RPA3P35244 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
RPA3P35244 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
RPA3P35244 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
RPA3P35244 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.27□□□□□ -1.89
RPA3P35244 RNA5SP167-201ENST00000365461 116 ntBASIC3.27□□□□□ -1.89
RPA3P35244 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.27□□□□□ -1.89
RPA3P35244 SNORA70E-201ENST00000384492 135 ntBASIC3.27□□□□□ -1.89
RPA3P35244 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
RPA3P35244 RNA5SP229-201ENST00000410809 99 ntBASIC3.27□□□□□ -1.89
RPA3P35244 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.27□□□□□ -1.89
RPA3P35244 AL049610.1-201ENST00000423374 372 ntBASIC3.27□□□□□ -1.89
RPA3P35244 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.27□□□□□ -1.89
RPA3P35244 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.27□□□□□ -1.89
RPA3P35244 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.27□□□□□ -1.89
RPA3P35244 RAD1P2-201ENST00000446414 663 ntBASIC3.27□□□□□ -1.89
RPA3P35244 RPL37P3-201ENST00000456825 293 ntBASIC3.27□□□□□ -1.89
RPA3P35244 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.27□□□□□ -1.89
RPA3P35244 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.27□□□□□ -1.89
RPA3P35244 AC078817.1-201ENST00000492623 435 ntBASIC3.27□□□□□ -1.89
RPA3P35244 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.27□□□□□ -1.89
RPA3P35244 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.27□□□□□ -1.89
RPA3P35244 HMGB1P47-201ENST00000511281 589 ntBASIC3.27□□□□□ -1.89
RPA3P35244 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.27□□□□□ -1.89
RPA3P35244 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.27□□□□□ -1.89
RPA3P35244 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.27□□□□□ -1.89
RPA3P35244 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.27□□□□□ -1.89
RPA3P35244 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.27□□□□□ -1.89
RPA3P35244 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.27□□□□□ -1.89
RPA3P35244 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.27□□□□□ -1.89
RPA3P35244 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.27□□□□□ -1.89
RPA3P35244 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.27□□□□□ -1.89
RPA3P35244 AC015967.1-201ENST00000619893 476 ntBASIC3.27□□□□□ -1.89
RPA3P35244 MIR6075-201ENST00000620782 95 ntBASIC3.27□□□□□ -1.89
RPA3P35244 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.27□□□□□ -1.89
RPA3P35244 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.27□□□□□ -1.89
RPA3P35244 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
RPA3P35244 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms