Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SLC25A36P1-201ENST00000590111 465 ntBASIC4.36□□□□□ -1.71
RB1P06400 AC021749.1-201ENST00000604322 607 ntBASIC4.36□□□□□ -1.71
RB1P06400 AC007179.3-201ENST00000604976 235 ntBASIC4.36□□□□□ -1.71
RB1P06400 AP003117.2-201ENST00000606010 545 ntBASIC4.36□□□□□ -1.71
RB1P06400 AC034229.4-201ENST00000607861 441 ntBASIC4.36□□□□□ -1.71
RB1P06400 AC009974.1-201ENST00000608881 455 ntBASIC4.36□□□□□ -1.71
RB1P06400 MIR6868-201ENST00000611215 58 ntBASIC4.36□□□□□ -1.71
RB1P06400 AC024257.5-201ENST00000612739 531 ntBASIC4.36□□□□□ -1.71
RB1P06400 AL391261.4-201ENST00000616012 481 ntBASIC4.36□□□□□ -1.71
RB1P06400 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.36□□□□□ -1.71
RB1P06400 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RB1P06400 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RB1P06400 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
RB1P06400 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RB1P06400 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RB1P06400 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
RB1P06400 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
RB1P06400 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.35□□□□□ -1.71
RB1P06400 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RB1P06400 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.35□□□□□ -1.71
RB1P06400 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
RB1P06400 RNU6-1066P-201ENST00000363573 105 ntBASIC4.35□□□□□ -1.71
RB1P06400 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.35□□□□□ -1.71
RB1P06400 SNORA9-201ENST00000384215 133 ntBASIC4.35□□□□□ -1.71
RB1P06400 RNU6-921P-201ENST00000384361 107 ntBASIC4.35□□□□□ -1.71
RB1P06400 MIR483-201ENST00000385070 76 ntBASIC4.35□□□□□ -1.71
RB1P06400 RNU6-1300P-201ENST00000391046 108 ntBASIC4.35□□□□□ -1.71
RB1P06400 ANAPC10P1-201ENST00000395991 556 ntBASIC4.35□□□□□ -1.71
RB1P06400 AL136133.1-201ENST00000413694 376 ntBASIC4.35□□□□□ -1.71
RB1P06400 AC007435.1-201ENST00000421086 415 ntBASIC4.35□□□□□ -1.71
RB1P06400 OR2X1P-201ENST00000421144 687 ntBASIC4.35□□□□□ -1.71
RB1P06400 AL513175.2-201ENST00000422071 443 ntBASIC4.35□□□□□ -1.71
RB1P06400 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.35□□□□□ -1.71
RB1P06400 SEPT7P5-201ENST00000434048 306 ntBASIC4.35□□□□□ -1.71
RB1P06400 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.35□□□□□ -1.71
RB1P06400 USP9YP22-201ENST00000438971 294 ntBASIC4.35□□□□□ -1.71
RB1P06400 AC093155.1-201ENST00000440164 826 ntBASIC4.35□□□□□ -1.71
RB1P06400 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.35□□□□□ -1.71
RB1P06400 AL121877.1-201ENST00000453704 622 ntBASIC4.35□□□□□ -1.71
RB1P06400 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.35□□□□□ -1.71
RB1P06400 AC012158.1-204ENST00000483430 465 ntBASIC4.35□□□□□ -1.71
RB1P06400 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.35□□□□□ -1.71
RB1P06400 RPS3AP6-201ENST00000484430 795 ntBASIC4.35□□□□□ -1.71
RB1P06400 RN7SL323P-201ENST00000494712 295 ntBASIC4.35□□□□□ -1.71
RB1P06400 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.35□□□□□ -1.71
RB1P06400 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC4.35□□□□□ -1.71
RB1P06400 AC016065.2-201ENST00000514530 444 ntBASIC4.35□□□□□ -1.71
RB1P06400 RNU1-95P-201ENST00000516357 160 ntBASIC4.35□□□□□ -1.71
RB1P06400 RNU1-128P-201ENST00000516704 160 ntBASIC4.35□□□□□ -1.71
RB1P06400 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.35□□□□□ -1.71
RB1P06400 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.35□□□□□ -1.71
RB1P06400 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.35□□□□□ -1.71
RB1P06400 AGGF1P8-201ENST00000562979 1000 ntBASIC4.35□□□□□ -1.71
RB1P06400 AGGF1P5-201ENST00000567900 919 ntBASIC4.35□□□□□ -1.71
RB1P06400 SRGNP1-201ENST00000603392 451 ntBASIC4.35□□□□□ -1.71
RB1P06400 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC4.35□□□□□ -1.71
RB1P06400 AC012314.7-201ENST00000619693 93 ntBASIC4.35□□□□□ -1.71
RB1P06400 AC098679.5-201ENST00000624394 571 ntBASIC4.35□□□□□ -1.71
RB1P06400 AC009093.8-201ENST00000641769 292 ntBASIC4.35□□□□□ -1.71
RB1P06400 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.35□□□□□ -1.71
RB1P06400 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RB1P06400 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.35□□□□□ -1.71
RB1P06400 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RB1P06400 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RB1P06400 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
RB1P06400 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RB1P06400 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RB1P06400 SAGE4P-201ENST00000442271 3381 ntBASIC4.34□□□□□ -1.71
RB1P06400 MIR34B-201ENST00000385076 84 ntBASIC4.34□□□□□ -1.71
RB1P06400 SNORA3.3-201ENST00000408712 125 ntBASIC4.34□□□□□ -1.71
RB1P06400 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.34□□□□□ -1.71
RB1P06400 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RB1P06400 AL356320.2-201ENST00000417263 507 ntBASIC4.34□□□□□ -1.71
RB1P06400 BOLA3P4-201ENST00000418151 400 ntBASIC4.34□□□□□ -1.71
RB1P06400 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.34□□□□□ -1.71
RB1P06400 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.34□□□□□ -1.71
RB1P06400 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.34□□□□□ -1.71
RB1P06400 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.34□□□□□ -1.71
RB1P06400 VN1R25P-201ENST00000443385 738 ntBASIC4.34□□□□□ -1.71
RB1P06400 RPS3AP12-201ENST00000443616 753 ntBASIC4.34□□□□□ -1.71
RB1P06400 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.34□□□□□ -1.71
RB1P06400 BX276092.4-201ENST00000452056 248 ntBASIC4.34□□□□□ -1.71
RB1P06400 NANOGP10-201ENST00000453325 895 ntBASIC4.34□□□□□ -1.71
RB1P06400 AC005008.1-201ENST00000456151 612 ntBASIC4.34□□□□□ -1.71
RB1P06400 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.34□□□□□ -1.71
RB1P06400 RPL36AP13-201ENST00000457490 317 ntBASIC4.34□□□□□ -1.71
RB1P06400 PNPLA4P1-201ENST00000458328 305 ntBASIC4.34□□□□□ -1.71
RB1P06400 AC005410.1-202ENST00000460347 485 ntBASIC4.34□□□□□ -1.71
RB1P06400 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.34□□□□□ -1.71
RB1P06400 AC005726.1-201ENST00000494679 427 ntBASIC4.34□□□□□ -1.71
RB1P06400 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.34□□□□□ -1.71
RB1P06400 STMN1P2-201ENST00000508435 439 ntBASIC4.34□□□□□ -1.71
RB1P06400 AC021146.3-201ENST00000511911 260 ntBASIC4.34□□□□□ -1.71
RB1P06400 RN7SKP277-201ENST00000516895 283 ntBASIC4.34□□□□□ -1.71
RB1P06400 RN7SKP234-201ENST00000517173 224 ntBASIC4.34□□□□□ -1.71
RB1P06400 MYL12AP1-201ENST00000518490 515 ntBASIC4.34□□□□□ -1.71
RB1P06400 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.34□□□□□ -1.71
RB1P06400 ARL2BPP5-201ENST00000523141 481 ntBASIC4.34□□□□□ -1.71
RB1P06400 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.34□□□□□ -1.71
RB1P06400 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms