Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 C4BPAP2-201ENST00000428434 478 ntBASIC4.22□□□□□ -1.73
PCDH9Q9HC56 USP9YP22-201ENST00000438971 294 ntBASIC4.22□□□□□ -1.73
PCDH9Q9HC56 MTND3P1-201ENST00000441336 220 ntBASIC4.22□□□□□ -1.73
PCDH9Q9HC56 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 AC010618.1-201ENST00000469924 477 ntBASIC4.22□□□□□ -1.73
PCDH9Q9HC56 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 AC010486.3-201ENST00000511602 785 ntBASIC4.22□□□□□ -1.73
PCDH9Q9HC56 AC018797.3-201ENST00000513388 1241 ntBASIC4.22□□□□□ -1.73
PCDH9Q9HC56 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 AP003730.1-201ENST00000524605 285 ntBASIC4.22□□□□□ -1.73
PCDH9Q9HC56 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 CYCSP29-201ENST00000533731 318 ntBASIC4.22□□□□□ -1.73
PCDH9Q9HC56 AP000619.3-201ENST00000535634 1127 ntBASIC4.22□□□□□ -1.73
PCDH9Q9HC56 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 RPL23AP87-202ENST00000573039 466 ntBASIC4.22□□□□□ -1.73
PCDH9Q9HC56 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 AC004223.2-201ENST00000590309 544 ntBASIC4.22□□□□□ -1.73
PCDH9Q9HC56 BNIP3P26-201ENST00000600827 554 ntBASIC4.22□□□□□ -1.73
PCDH9Q9HC56 AL355816.1-201ENST00000607951 118 ntBASIC4.22□□□□□ -1.73
PCDH9Q9HC56 AP004247.3-201ENST00000608682 624 ntBASIC4.22□□□□□ -1.73
PCDH9Q9HC56 AC121761.2-201ENST00000617300 689 ntBASIC4.22□□□□□ -1.73
PCDH9Q9HC56 MIR8059-201ENST00000620427 81 ntBASIC4.22□□□□□ -1.73
PCDH9Q9HC56 CR392039.4-201ENST00000624968 501 ntBASIC4.22□□□□□ -1.73
PCDH9Q9HC56 CDRT1-208ENST00000630868 794 ntBASIC4.22□□□□□ -1.73
PCDH9Q9HC56 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 MIR6830-201ENST00000636015 70 ntBASIC4.22□□□□□ -1.73
PCDH9Q9HC56 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PCDH9Q9HC56 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.21□□□□□ -1.73
PCDH9Q9HC56 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
PCDH9Q9HC56 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PCDH9Q9HC56 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.73
PCDH9Q9HC56 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 RNA5SP502-201ENST00000362694 119 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 SNORA62-201ENST00000365493 153 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 RNU6-157P-201ENST00000383957 107 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 SNORA51.12-201ENST00000384448 134 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 TAF9BP1-201ENST00000396646 746 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 RNU6-757P-201ENST00000410334 100 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 MTND1P32-201ENST00000433043 938 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC092393.1-201ENST00000439625 742 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 RPL21P134-201ENST00000453468 483 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AL133477.1-201ENST00000457472 514 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 VPS26AP1-201ENST00000483197 979 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC109458.1-201ENST00000508858 316 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC117522.2-201ENST00000510049 657 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC048346.1-201ENST00000510247 144 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 KRT19P6-201ENST00000510983 209 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 MRPS33P3-201ENST00000513456 322 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC008494.2-201ENST00000514544 370 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 Y_RNA.688-201ENST00000516565 95 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC087808.1-201ENST00000520501 361 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 ELOCP32-201ENST00000548625 324 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 MTCYBP27-201ENST00000555160 670 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 GNRHR2P1-201ENST00000555315 631 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC008015.1-201ENST00000555505 465 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC087465.1-201ENST00000560574 245 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 Z99497.2-201ENST00000603634 310 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC069545.1-201ENST00000605671 358 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC018638.7-201ENST00000605836 1114 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AL451074.6-201ENST00000608512 729 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 MIR6716-201ENST00000613413 80 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC004825.2-201ENST00000616634 455 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC026422.1-201ENST00000623961 452 ntBASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDH9Q9HC56 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms