Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL5A1P20908 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.02□□□□□ -1.93
COL5A1P20908 AC010149.2-201ENST00000637608 315 ntBASIC3.02□□□□□ -1.93
COL5A1P20908 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.02□□□□□ -1.93
COL5A1P20908 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL5A1P20908 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
COL5A1P20908 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.01□□□□□ -1.93
COL5A1P20908 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.01□□□□□ -1.93
COL5A1P20908 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
COL5A1P20908 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
COL5A1P20908 OR5J1P-201ENST00000313544 939 ntBASIC3.01□□□□□ -1.93
COL5A1P20908 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL5A1P20908 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL5A1P20908 MIR184-201ENST00000384962 84 ntBASIC3.01□□□□□ -1.93
COL5A1P20908 AL445529.1-201ENST00000398713 389 ntBASIC3.01□□□□□ -1.93
COL5A1P20908 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.01□□□□□ -1.93
COL5A1P20908 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.01□□□□□ -1.93
COL5A1P20908 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
COL5A1P20908 AC073136.2-201ENST00000417282 849 ntBASIC3.01□□□□□ -1.93
COL5A1P20908 RPL37P4-201ENST00000448908 268 ntBASIC3.01□□□□□ -1.93
COL5A1P20908 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.01□□□□□ -1.93
COL5A1P20908 AL513124.1-201ENST00000450410 614 ntBASIC3.01□□□□□ -1.93
COL5A1P20908 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.01□□□□□ -1.93
COL5A1P20908 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC3.01□□□□□ -1.93
COL5A1P20908 SNORA70.19-201ENST00000516717 90 ntBASIC3.01□□□□□ -1.93
COL5A1P20908 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.01□□□□□ -1.93
COL5A1P20908 AC008126.1-201ENST00000549019 480 ntBASIC3.01□□□□□ -1.93
COL5A1P20908 AC084033.1-201ENST00000550830 633 ntBASIC3.01□□□□□ -1.93
COL5A1P20908 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.01□□□□□ -1.93
COL5A1P20908 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.01□□□□□ -1.93
COL5A1P20908 ATP1B3P1-201ENST00000605365 821 ntBASIC3.01□□□□□ -1.93
COL5A1P20908 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.01□□□□□ -1.93
COL5A1P20908 AC078899.5-201ENST00000612475 178 ntBASIC3.01□□□□□ -1.93
COL5A1P20908 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.01□□□□□ -1.93
COL5A1P20908 uc_338.32-201ENST00000615087 172 ntBASIC3.01□□□□□ -1.93
COL5A1P20908 AC231759.1-201ENST00000616455 597 ntBASIC3.01□□□□□ -1.93
COL5A1P20908 AC099506.2-201ENST00000623074 221 ntBASIC3.01□□□□□ -1.93
COL5A1P20908 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.01□□□□□ -1.93
COL5A1P20908 AP003400.6-201ENST00000624698 740 ntBASIC3.01□□□□□ -1.93
COL5A1P20908 AC019080.5-201ENST00000624891 757 ntBASIC3.01□□□□□ -1.93
COL5A1P20908 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL5A1P20908 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL5A1P20908 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
COL5A1P20908 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
COL5A1P20908 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
COL5A1P20908 RNU6-304P-201ENST00000364855 107 ntBASIC3□□□□□ -1.93
COL5A1P20908 SNORA79B-201ENST00000410557 148 ntBASIC3□□□□□ -1.93
COL5A1P20908 RN7SKP222-201ENST00000410651 315 ntBASIC3□□□□□ -1.93
COL5A1P20908 NPM1P11-201ENST00000417106 855 ntBASIC3□□□□□ -1.93
COL5A1P20908 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3□□□□□ -1.93
COL5A1P20908 RFESDP1-201ENST00000422350 461 ntBASIC3□□□□□ -1.93
COL5A1P20908 TRBV8-2-201ENST00000475637 270 ntBASIC3□□□□□ -1.93
COL5A1P20908 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3□□□□□ -1.93
COL5A1P20908 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3□□□□□ -1.93
COL5A1P20908 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3□□□□□ -1.93
COL5A1P20908 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3□□□□□ -1.93
COL5A1P20908 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3□□□□□ -1.93
COL5A1P20908 MIR3908-201ENST00000579798 126 ntBASIC3□□□□□ -1.93
COL5A1P20908 AC020658.4-201ENST00000613987 684 ntBASIC3□□□□□ -1.93
COL5A1P20908 MIR7843-201ENST00000622274 79 ntBASIC3□□□□□ -1.93
COL5A1P20908 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3□□□□□ -1.93
COL5A1P20908 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3□□□□□ -1.93
COL5A1P20908 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
COL5A1P20908 AC000403.1-201ENST00000613696 3585 ntBASIC3□□□□□ -1.93
COL5A1P20908 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
COL5A1P20908 SNORA18.3-201ENST00000384122 132 ntBASIC3□□□□□ -1.93
COL5A1P20908 RPL7P25-201ENST00000404151 721 ntBASIC3□□□□□ -1.93
COL5A1P20908 RANP4-201ENST00000413361 655 ntBASIC3□□□□□ -1.93
COL5A1P20908 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3□□□□□ -1.93
COL5A1P20908 AP000936.3-201ENST00000438127 255 ntBASIC3□□□□□ -1.93
COL5A1P20908 KRTAP19-11P-201ENST00000439851 104 ntBASIC3□□□□□ -1.93
COL5A1P20908 AC093156.1-201ENST00000440382 670 ntBASIC3□□□□□ -1.93
COL5A1P20908 AL135938.1-201ENST00000443141 297 ntBASIC3□□□□□ -1.93
COL5A1P20908 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC3□□□□□ -1.93
COL5A1P20908 AC126389.1-201ENST00000477436 290 ntBASIC3□□□□□ -1.93
COL5A1P20908 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3□□□□□ -1.93
COL5A1P20908 FABP5P12-201ENST00000515543 389 ntBASIC3□□□□□ -1.93
COL5A1P20908 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3□□□□□ -1.93
COL5A1P20908 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3□□□□□ -1.93
COL5A1P20908 AC115989.2-201ENST00000578640 563 ntBASIC3□□□□□ -1.93
COL5A1P20908 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3□□□□□ -1.93
COL5A1P20908 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3□□□□□ -1.93
COL5A1P20908 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3□□□□□ -1.93
COL5A1P20908 AL118508.4-201ENST00000624142 1176 ntBASIC3□□□□□ -1.93
COL5A1P20908 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
COL5A1P20908 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
COL5A1P20908 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL5A1P20908 OR1S2-201ENST00000302592 978 ntBASIC2.99□□□□□ -1.93
COL5A1P20908 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.99□□□□□ -1.93
COL5A1P20908 AC012497.1-201ENST00000429392 575 ntBASIC2.99□□□□□ -1.93
COL5A1P20908 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.99□□□□□ -1.93
COL5A1P20908 AL450263.2-201ENST00000439400 589 ntBASIC2.99□□□□□ -1.93
COL5A1P20908 AC135999.1-201ENST00000478962 479 ntBASIC2.99□□□□□ -1.93
COL5A1P20908 TRBV12-1-201ENST00000479785 344 ntBASIC2.99□□□□□ -1.93
COL5A1P20908 RPS4XP22-201ENST00000480755 780 ntBASIC2.99□□□□□ -1.93
COL5A1P20908 RNU6-551P-201ENST00000516661 103 ntBASIC2.99□□□□□ -1.93
COL5A1P20908 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
COL5A1P20908 AC018552.3-201ENST00000567416 561 ntBASIC2.99□□□□□ -1.93
COL5A1P20908 MIR4435-1-201ENST00000582552 80 ntBASIC2.99□□□□□ -1.93
COL5A1P20908 AL354950.1-201ENST00000614150 568 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms