Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
H2afb3S4R1G7 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
H2afb3S4R1G7 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb3S4R1G7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb3S4R1G7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb3S4R1G7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb3S4R1G7 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb3S4R1G7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb3S4R1G7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.81□□□□□ -0.04
H2afb3S4R1G7 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb3S4R1G7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb3S4R1G7 Gm7791-201ENSMUST00000219066 539 ntBASIC14.81□□□□□ -0.04
H2afb3S4R1G7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb3S4R1G7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
H2afb3S4R1G7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.81□□□□□ -0.04
H2afb3S4R1G7 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb3S4R1G7 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb3S4R1G7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb3S4R1G7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb3S4R1G7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
H2afb3S4R1G7 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
H2afb3S4R1G7 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.79□□□□□ -0.04
H2afb3S4R1G7 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.79□□□□□ -0.04
H2afb3S4R1G7 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Gm715-201ENSMUST00000117865 831 ntBASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Gm27463-201ENSMUST00000183569 57 ntBASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.78□□□□□ -0.04
H2afb3S4R1G7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms