Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.19■□□□□ 0.18
Atp6v1c1Q9Z1G3 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6v1c1Q9Z1G3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6v1c1Q9Z1G3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6v1c1Q9Z1G3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp6v1c1Q9Z1G3 Prob1-201ENSMUST00000097619 3021 ntBASIC16.19■□□□□ 0.18
Atp6v1c1Q9Z1G3 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6v1c1Q9Z1G3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6v1c1Q9Z1G3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6v1c1Q9Z1G3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6v1c1Q9Z1G3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6v1c1Q9Z1G3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6v1c1Q9Z1G3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6v1c1Q9Z1G3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.18■□□□□ 0.18
Atp6v1c1Q9Z1G3 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6v1c1Q9Z1G3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6v1c1Q9Z1G3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.18■□□□□ 0.18
Atp6v1c1Q9Z1G3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.18■□□□□ 0.18
Atp6v1c1Q9Z1G3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6v1c1Q9Z1G3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6v1c1Q9Z1G3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Atp6v1c1Q9Z1G3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6v1c1Q9Z1G3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6v1c1Q9Z1G3 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp6v1c1Q9Z1G3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6v1c1Q9Z1G3 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6v1c1Q9Z1G3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6v1c1Q9Z1G3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Atp6v1c1Q9Z1G3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6v1c1Q9Z1G3 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6v1c1Q9Z1G3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6v1c1Q9Z1G3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Atp6v1c1Q9Z1G3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6v1c1Q9Z1G3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6v1c1Q9Z1G3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6v1c1Q9Z1G3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Atp6v1c1Q9Z1G3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.17■□□□□ 0.18
Atp6v1c1Q9Z1G3 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.17■□□□□ 0.18
Atp6v1c1Q9Z1G3 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6v1c1Q9Z1G3 Mtag2-201ENSMUST00000058665 714 ntBASIC16.17■□□□□ 0.18
Atp6v1c1Q9Z1G3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6v1c1Q9Z1G3 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6v1c1Q9Z1G3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6v1c1Q9Z1G3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Atp6v1c1Q9Z1G3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6v1c1Q9Z1G3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Atp6v1c1Q9Z1G3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Atp6v1c1Q9Z1G3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atp6v1c1Q9Z1G3 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atp6v1c1Q9Z1G3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Atp6v1c1Q9Z1G3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.16■□□□□ 0.18
Atp6v1c1Q9Z1G3 Gm10138-203ENSMUST00000206952 366 ntBASIC16.16■□□□□ 0.18
Atp6v1c1Q9Z1G3 Gm29791-202ENSMUST00000207888 369 ntBASIC16.16■□□□□ 0.18
Atp6v1c1Q9Z1G3 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atp6v1c1Q9Z1G3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atp6v1c1Q9Z1G3 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Atp6v1c1Q9Z1G3 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Atp6v1c1Q9Z1G3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atp6v1c1Q9Z1G3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atp6v1c1Q9Z1G3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atp6v1c1Q9Z1G3 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.16■□□□□ 0.18
Atp6v1c1Q9Z1G3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Atp6v1c1Q9Z1G3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Atp6v1c1Q9Z1G3 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atp6v1c1Q9Z1G3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Atp6v1c1Q9Z1G3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Atp6v1c1Q9Z1G3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.15■□□□□ 0.18
Atp6v1c1Q9Z1G3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atp6v1c1Q9Z1G3 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Atp6v1c1Q9Z1G3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atp6v1c1Q9Z1G3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atp6v1c1Q9Z1G3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Atp6v1c1Q9Z1G3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.15■□□□□ 0.18
Atp6v1c1Q9Z1G3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atp6v1c1Q9Z1G3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Atp6v1c1Q9Z1G3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Atp6v1c1Q9Z1G3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Atp6v1c1Q9Z1G3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atp6v1c1Q9Z1G3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atp6v1c1Q9Z1G3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.15■□□□□ 0.18
Atp6v1c1Q9Z1G3 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atp6v1c1Q9Z1G3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atp6v1c1Q9Z1G3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Atp6v1c1Q9Z1G3 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Atp6v1c1Q9Z1G3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Atp6v1c1Q9Z1G3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Atp6v1c1Q9Z1G3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Atp6v1c1Q9Z1G3 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atp6v1c1Q9Z1G3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Atp6v1c1Q9Z1G3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atp6v1c1Q9Z1G3 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atp6v1c1Q9Z1G3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atp6v1c1Q9Z1G3 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atp6v1c1Q9Z1G3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atp6v1c1Q9Z1G3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atp6v1c1Q9Z1G3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atp6v1c1Q9Z1G3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atp6v1c1Q9Z1G3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atp6v1c1Q9Z1G3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Atp6v1c1Q9Z1G3 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms