Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1h3Q9Z0Y9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.84■□□□□ 0.45
Nr1h3Q9Z0Y9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nr1h3Q9Z0Y9 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nr1h3Q9Z0Y9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Nr1h3Q9Z0Y9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Nr1h3Q9Z0Y9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nr1h3Q9Z0Y9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1h3Q9Z0Y9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.83■□□□□ 0.44
Nr1h3Q9Z0Y9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Nr1h3Q9Z0Y9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1h3Q9Z0Y9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.83■□□□□ 0.44
Nr1h3Q9Z0Y9 Gm18733-201ENSMUST00000173950 856 ntBASIC17.83■□□□□ 0.44
Nr1h3Q9Z0Y9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Nr1h3Q9Z0Y9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
Nr1h3Q9Z0Y9 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.83■□□□□ 0.44
Nr1h3Q9Z0Y9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.44
Nr1h3Q9Z0Y9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1h3Q9Z0Y9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1h3Q9Z0Y9 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1h3Q9Z0Y9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1h3Q9Z0Y9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1h3Q9Z0Y9 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1h3Q9Z0Y9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1h3Q9Z0Y9 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1h3Q9Z0Y9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nr1h3Q9Z0Y9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1h3Q9Z0Y9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1h3Q9Z0Y9 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.82■□□□□ 0.44
Nr1h3Q9Z0Y9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1h3Q9Z0Y9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1h3Q9Z0Y9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1h3Q9Z0Y9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Nr1h3Q9Z0Y9 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1h3Q9Z0Y9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.82■□□□□ 0.44
Nr1h3Q9Z0Y9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1h3Q9Z0Y9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.82■□□□□ 0.44
Nr1h3Q9Z0Y9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1h3Q9Z0Y9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.82■□□□□ 0.44
Nr1h3Q9Z0Y9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1h3Q9Z0Y9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Nr1h3Q9Z0Y9 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1h3Q9Z0Y9 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1h3Q9Z0Y9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1h3Q9Z0Y9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nr1h3Q9Z0Y9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.81■□□□□ 0.44
Nr1h3Q9Z0Y9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1h3Q9Z0Y9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Nr1h3Q9Z0Y9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1h3Q9Z0Y9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1h3Q9Z0Y9 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.8■□□□□ 0.44
Nr1h3Q9Z0Y9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1h3Q9Z0Y9 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.8■□□□□ 0.44
Nr1h3Q9Z0Y9 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.8■□□□□ 0.44
Nr1h3Q9Z0Y9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1h3Q9Z0Y9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1h3Q9Z0Y9 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1h3Q9Z0Y9 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.8■□□□□ 0.44
Nr1h3Q9Z0Y9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1h3Q9Z0Y9 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Nr1h3Q9Z0Y9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1h3Q9Z0Y9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1h3Q9Z0Y9 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Nr1h3Q9Z0Y9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1h3Q9Z0Y9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nr1h3Q9Z0Y9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h3Q9Z0Y9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h3Q9Z0Y9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h3Q9Z0Y9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Nr1h3Q9Z0Y9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.79■□□□□ 0.44
Nr1h3Q9Z0Y9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms