Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ClcnkaQ9WUB7 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ClcnkaQ9WUB7 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Actl10-202ENSMUST00000226583 1501 ntBASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Mir1668-201ENSMUST00000184114 107 ntBASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Mir7071-201ENSMUST00000184847 69 ntBASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ClcnkaQ9WUB7 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Gm13186-201ENSMUST00000118031 316 ntBASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Gm10566-201ENSMUST00000086739 996 ntBASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ClcnkaQ9WUB7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClcnkaQ9WUB7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClcnkaQ9WUB7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ClcnkaQ9WUB7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClcnkaQ9WUB7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClcnkaQ9WUB7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClcnkaQ9WUB7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
ClcnkaQ9WUB7 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
ClcnkaQ9WUB7 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.12■□□□□ 0.01
ClcnkaQ9WUB7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ClcnkaQ9WUB7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ClcnkaQ9WUB7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms