Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col13a1Q9R1N9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Gm23935-201ENSMUST00000102303 57 ntBASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Gm24270-201ENSMUST00000102326 57 ntBASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Gm11336-201ENSMUST00000118168 334 ntBASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Gm24245-201ENSMUST00000157318 57 ntBASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col13a1Q9R1N9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col13a1Q9R1N9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col13a1Q9R1N9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col13a1Q9R1N9 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col13a1Q9R1N9 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Col13a1Q9R1N9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Col13a1Q9R1N9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Col13a1Q9R1N9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Gm15467-201ENSMUST00000120582 445 ntBASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Col13a1Q9R1N9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Gm10060-201ENSMUST00000212002 111 ntBASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.94□□□□□ -0.18
Col13a1Q9R1N9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms