Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh17Q9R100 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh17Q9R100 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh17Q9R100 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh17Q9R100 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh17Q9R100 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh17Q9R100 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh17Q9R100 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh17Q9R100 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh17Q9R100 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cdh17Q9R100 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh17Q9R100 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.04■□□□□ 0.16
Cdh17Q9R100 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh17Q9R100 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh17Q9R100 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Cdh17Q9R100 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh17Q9R100 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Cdh17Q9R100 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh17Q9R100 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh17Q9R100 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh17Q9R100 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh17Q9R100 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.04■□□□□ 0.16
Cdh17Q9R100 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh17Q9R100 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh17Q9R100 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh17Q9R100 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh17Q9R100 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh17Q9R100 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.04■□□□□ 0.16
Cdh17Q9R100 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh17Q9R100 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh17Q9R100 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cdh17Q9R100 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh17Q9R100 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh17Q9R100 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.03■□□□□ 0.16
Cdh17Q9R100 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.03■□□□□ 0.16
Cdh17Q9R100 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh17Q9R100 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh17Q9R100 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh17Q9R100 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh17Q9R100 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Cdh17Q9R100 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.03■□□□□ 0.16
Cdh17Q9R100 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh17Q9R100 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Cdh17Q9R100 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cdh17Q9R100 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cdh17Q9R100 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh17Q9R100 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh17Q9R100 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh17Q9R100 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh17Q9R100 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh17Q9R100 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh17Q9R100 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh17Q9R100 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh17Q9R100 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cdh17Q9R100 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdh17Q9R100 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.02■□□□□ 0.16
Cdh17Q9R100 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Cdh17Q9R100 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdh17Q9R100 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdh17Q9R100 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cdh17Q9R100 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Cdh17Q9R100 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cdh17Q9R100 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.02■□□□□ 0.16
Cdh17Q9R100 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cdh17Q9R100 Gm5417-201ENSMUST00000079706 384 ntBASIC16.02■□□□□ 0.16
Cdh17Q9R100 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdh17Q9R100 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cdh17Q9R100 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdh17Q9R100 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdh17Q9R100 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.15
Cdh17Q9R100 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cdh17Q9R100 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdh17Q9R100 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdh17Q9R100 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cdh17Q9R100 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cdh17Q9R100 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.02■□□□□ 0.15
Cdh17Q9R100 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cdh17Q9R100 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cdh17Q9R100 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdh17Q9R100 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdh17Q9R100 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdh17Q9R100 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Cdh17Q9R100 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Cdh17Q9R100 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdh17Q9R100 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cdh17Q9R100 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdh17Q9R100 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdh17Q9R100 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdh17Q9R100 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cdh17Q9R100 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Cdh17Q9R100 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cdh17Q9R100 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdh17Q9R100 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdh17Q9R100 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdh17Q9R100 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdh17Q9R100 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.01■□□□□ 0.15
Cdh17Q9R100 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdh17Q9R100 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cdh17Q9R100 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cdh17Q9R100 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms