Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RpgrQ9R0X5 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.74■□□□□ 0.27
RpgrQ9R0X5 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RpgrQ9R0X5 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.74■□□□□ 0.27
RpgrQ9R0X5 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RpgrQ9R0X5 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RpgrQ9R0X5 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
RpgrQ9R0X5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RpgrQ9R0X5 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
RpgrQ9R0X5 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RpgrQ9R0X5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RpgrQ9R0X5 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RpgrQ9R0X5 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RpgrQ9R0X5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 Mir6982-201ENSMUST00000184354 68 ntBASIC16.73■□□□□ 0.27
RpgrQ9R0X5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RpgrQ9R0X5 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.72■□□□□ 0.27
RpgrQ9R0X5 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RpgrQ9R0X5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RpgrQ9R0X5 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RpgrQ9R0X5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RpgrQ9R0X5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RpgrQ9R0X5 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RpgrQ9R0X5 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RpgrQ9R0X5 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RpgrQ9R0X5 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RpgrQ9R0X5 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RpgrQ9R0X5 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RpgrQ9R0X5 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RpgrQ9R0X5 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RpgrQ9R0X5 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RpgrQ9R0X5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RpgrQ9R0X5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
RpgrQ9R0X5 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RpgrQ9R0X5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RpgrQ9R0X5 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.71■□□□□ 0.27
RpgrQ9R0X5 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RpgrQ9R0X5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
RpgrQ9R0X5 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
RpgrQ9R0X5 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.71■□□□□ 0.26
RpgrQ9R0X5 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
RpgrQ9R0X5 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RpgrQ9R0X5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RpgrQ9R0X5 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RpgrQ9R0X5 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RpgrQ9R0X5 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RpgrQ9R0X5 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RpgrQ9R0X5 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RpgrQ9R0X5 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.7■□□□□ 0.26
RpgrQ9R0X5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RpgrQ9R0X5 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RpgrQ9R0X5 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.7■□□□□ 0.26
RpgrQ9R0X5 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms