Protein–RNA interactions for Protein: Q9QZ28

Six6, Homeobox protein SIX6, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six6Q9QZ28 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Six6Q9QZ28 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six6Q9QZ28 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six6Q9QZ28 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Six6Q9QZ28 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six6Q9QZ28 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.02□□□□□ -0.16
Six6Q9QZ28 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six6Q9QZ28 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
Six6Q9QZ28 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six6Q9QZ28 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six6Q9QZ28 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six6Q9QZ28 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six6Q9QZ28 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six6Q9QZ28 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six6Q9QZ28 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six6Q9QZ28 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six6Q9QZ28 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Six6Q9QZ28 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Six6Q9QZ28 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Six6Q9QZ28 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six6Q9QZ28 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.02□□□□□ -0.17
Six6Q9QZ28 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six6Q9QZ28 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Six6Q9QZ28 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Six6Q9QZ28 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Six6Q9QZ28 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.01□□□□□ -0.17
Six6Q9QZ28 Gm6139-201ENSMUST00000079261 882 ntBASIC14.01□□□□□ -0.17
Six6Q9QZ28 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Six6Q9QZ28 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Six6Q9QZ28 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Six6Q9QZ28 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Six6Q9QZ28 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six6Q9QZ28 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Six6Q9QZ28 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Six6Q9QZ28 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Six6Q9QZ28 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six6Q9QZ28 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14□□□□□ -0.17
Six6Q9QZ28 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Six6Q9QZ28 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Six6Q9QZ28 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six6Q9QZ28 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Six6Q9QZ28 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Six6Q9QZ28 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six6Q9QZ28 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six6Q9QZ28 Mir2861-201ENSMUST00000175539 82 ntBASIC14□□□□□ -0.17
Six6Q9QZ28 Gm21956-201ENSMUST00000179946 522 ntBASIC14□□□□□ -0.17
Six6Q9QZ28 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14□□□□□ -0.17
Six6Q9QZ28 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14□□□□□ -0.17
Six6Q9QZ28 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14□□□□□ -0.17
Six6Q9QZ28 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six6Q9QZ28 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14□□□□□ -0.17
Six6Q9QZ28 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Six6Q9QZ28 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six6Q9QZ28 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14□□□□□ -0.17
Six6Q9QZ28 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Six6Q9QZ28 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six6Q9QZ28 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Six6Q9QZ28 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14□□□□□ -0.17
Six6Q9QZ28 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six6Q9QZ28 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Six6Q9QZ28 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six6Q9QZ28 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Six6Q9QZ28 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC13.99□□□□□ -0.17
Six6Q9QZ28 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six6Q9QZ28 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six6Q9QZ28 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six6Q9QZ28 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six6Q9QZ28 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six6Q9QZ28 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six6Q9QZ28 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six6Q9QZ28 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Six6Q9QZ28 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six6Q9QZ28 Gm43017-201ENSMUST00000198296 752 ntBASIC13.99□□□□□ -0.17
Six6Q9QZ28 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six6Q9QZ28 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six6Q9QZ28 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Six6Q9QZ28 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Six6Q9QZ28 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms