Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sec61a2Q9JLR1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sec61a2Q9JLR1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sec61a2Q9JLR1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Sec61a2Q9JLR1 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sec61a2Q9JLR1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Gm10231-201ENSMUST00000181584 441 ntBASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Gm10175-202ENSMUST00000208752 441 ntBASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 AC159205.6-201ENSMUST00000224935 887 ntBASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sec61a2Q9JLR1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sec61a2Q9JLR1 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms