Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Gm27357-201ENSMUST00000183754 135 ntBASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Gm10819-201ENSMUST00000099988 561 ntBASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rfx5Q9JL61 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rfx5Q9JL61 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rfx5Q9JL61 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx5Q9JL61 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx5Q9JL61 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx5Q9JL61 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.34■□□□□ 0.37
Rfx5Q9JL61 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx5Q9JL61 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx5Q9JL61 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rfx5Q9JL61 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx5Q9JL61 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx5Q9JL61 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx5Q9JL61 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx5Q9JL61 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx5Q9JL61 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx5Q9JL61 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx5Q9JL61 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx5Q9JL61 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx5Q9JL61 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx5Q9JL61 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx5Q9JL61 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rfx5Q9JL61 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Rfx5Q9JL61 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rfx5Q9JL61 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfx5Q9JL61 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfx5Q9JL61 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfx5Q9JL61 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfx5Q9JL61 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfx5Q9JL61 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rfx5Q9JL61 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx5Q9JL61 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Rfx5Q9JL61 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.33■□□□□ 0.36
Rfx5Q9JL61 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx5Q9JL61 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.33■□□□□ 0.36
Rfx5Q9JL61 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Rfx5Q9JL61 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx5Q9JL61 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx5Q9JL61 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx5Q9JL61 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx5Q9JL61 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Rfx5Q9JL61 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rfx5Q9JL61 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Rfx5Q9JL61 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx5Q9JL61 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Rfx5Q9JL61 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx5Q9JL61 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.32■□□□□ 0.36
Rfx5Q9JL61 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx5Q9JL61 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx5Q9JL61 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx5Q9JL61 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.32■□□□□ 0.36
Rfx5Q9JL61 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rfx5Q9JL61 Mir3081-201ENSMUST00000175305 84 ntBASIC17.32■□□□□ 0.36
Rfx5Q9JL61 Gm17807-201ENSMUST00000186869 298 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms