Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.82□□□□□ -0.04
Trem1Q9JKE2 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trem1Q9JKE2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trem1Q9JKE2 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trem1Q9JKE2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trem1Q9JKE2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trem1Q9JKE2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trem1Q9JKE2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trem1Q9JKE2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trem1Q9JKE2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trem1Q9JKE2 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trem1Q9JKE2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.78□□□□□ -0.04
Trem1Q9JKE2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.78□□□□□ -0.04
Trem1Q9JKE2 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trem1Q9JKE2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trem1Q9JKE2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trem1Q9JKE2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trem1Q9JKE2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.78□□□□□ -0.04
Trem1Q9JKE2 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms