Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tnfrsf13bQ9ET35 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf13bQ9ET35 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf13bQ9ET35 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf13bQ9ET35 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf13bQ9ET35 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf13bQ9ET35 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf13bQ9ET35 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Tnfrsf13bQ9ET35 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf13bQ9ET35 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf13bQ9ET35 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf13bQ9ET35 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf13bQ9ET35 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tnfrsf13bQ9ET35 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Tnfrsf13bQ9ET35 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Gm7638-201ENSMUST00000121348 967 ntBASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Il3ra-202ENSMUST00000223589 738 ntBASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Tnfrsf13bQ9ET35 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Tnfrsf13bQ9ET35 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfrsf13bQ9ET35 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfrsf13bQ9ET35 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfrsf13bQ9ET35 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfrsf13bQ9ET35 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Tnfrsf13bQ9ET35 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Tnfrsf13bQ9ET35 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Gm20049-201ENSMUST00000219950 730 ntBASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Tnfrsf13bQ9ET35 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tnfrsf13bQ9ET35 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms